1v6t: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
m Protected "1v6t" [edit=sysop:move=sysop]
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:1v6t.png|left|200px]]


{{STRUCTURE_1v6t|  PDB=1v6t  |  SCENE=  }}
==Crystal Structure of Lactam Utilization Protein from Pyrococcus horikoshii Ot3==
 
<StructureSection load='1v6t' size='340' side='right'caption='[[1v6t]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
===Crystal Structure of Lactam Utilization Protein from Pyrococcus horikoshii Ot3===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[1v6t]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1V6T OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1V6T FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1v6t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1v6t OCA], [https://pdbe.org/1v6t PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1v6t RCSB], [https://www.ebi.ac.uk/pdbsum/1v6t PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1v6t ProSAT], [https://www.topsan.org/Proteins/RSGI/1v6t TOPSAN]</span></td></tr>
[[1v6t]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1V6T OCA].  
</table>
[[Category: Pyrococcus horikoshii]]
== Function ==
[[Category: Kunishima, N.]]
[https://www.uniprot.org/uniprot/PXPA_PYRHO PXPA_PYRHO] Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.[HAMAP-Rule:MF_00691]
[[Category: Mizutani, H.]]
== Evolutionary Conservation ==
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Lactam utilization protein]]
Check<jmol>
[[Category: Riken structural genomics/proteomics initiative]]
  <jmolCheckbox>
[[Category: Rsgi]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/v6/1v6t_consurf.spt"</scriptWhenChecked>
[[Category: Structural genomic]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Tim-barrel]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Unknown function]]
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1v6t ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Pyrococcus horikoshii OT3]]
[[Category: Kunishima N]]
[[Category: Mizutani H]]

Latest revision as of 02:58, 28 December 2023

Crystal Structure of Lactam Utilization Protein from Pyrococcus horikoshii Ot3Crystal Structure of Lactam Utilization Protein from Pyrococcus horikoshii Ot3

Structural highlights

1v6t is a 1 chain structure with sequence from Pyrococcus horikoshii OT3. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.7Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

PXPA_PYRHO Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.[HAMAP-Rule:MF_00691]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1v6t, resolution 1.70Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA