1ud9: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-[[Image:1ud9.gif|left|200px]]<br /><applet load="1ud9" size="350" color="white" frame="true" align="right" spinBox="true"
-caption="1ud9, resolution 1.68&Aring;" />
-'''Crystal Structure of Proliferating Cell Nuclear Antigen (PCNA) Homolog From Sulfolobus tokodaii'''<br />
-==About this Structure==
+==Crystal Structure of Proliferating Cell Nuclear Antigen (PCNA) Homolog From Sulfolobus tokodaii==
-UD9 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Sulfolobus_tokodaii Sulfolobus tokodaii] with <scene name='pdbligand=ZN:'>ZN</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UD9 OCA].
+<StructureSection load='1ud9' size='340' side='right'caption='[[1ud9]], [[Resolution|resolution]] 1.68&Aring;' scene=''>
-[[Category: Single protein]]
+== Structural highlights ==
-[[Category: Sulfolobus tokodaii]]
+<table><tr><td colspan='2'>[[1ud9]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Sulfurisphaera_tokodaii Sulfurisphaera tokodaii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UD9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UD9 FirstGlance]. <br>
-[[Category: Kumagai, I.]]
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.68&#8491;</td></tr>
-[[Category: Tanabe, E.]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-[[Category: Tanaka, I.]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ud9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ud9 OCA], [https://pdbe.org/1ud9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ud9 RCSB], [https://www.ebi.ac.uk/pdbsum/1ud9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ud9 ProSAT]</span></td></tr>
-[[Category: Tanaka, Y.]]
+</table>
-[[Category: Tsumoto, K.]]
+== Function ==
-[[Category: Yao, M.]]
+[https://www.uniprot.org/uniprot/PCNA1_SULTO PCNA1_SULTO] Sliding clamp subunit. Responsible for tethering the catalytic subunit of DNA polymerase to DNA during high-speed replication (By similarity).
-[[Category: Yasutake, Y.]]
+== Evolutionary Conservation ==
-[[Category: ZN]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: dna replication]]
+Check<jmol>
-[[Category: dna-binding]]
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ud/1ud9_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ud9 ConSurf].
+<div style="clear:both"></div>
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 15:23:12 2008''
+==See Also==
+*[[Proliferating cell nuclear antigen 3D structures|Proliferating cell nuclear antigen 3D structures]]
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
+[[Category: Sulfurisphaera tokodaii]]
+[[Category: Kumagai I]]
+[[Category: Tanabe E]]
+[[Category: Tanaka I]]
+[[Category: Tanaka Y]]
+[[Category: Tsumoto K]]
+[[Category: Yao M]]
+[[Category: Yasutake Y]]