1j4u: Difference between revisions

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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 ==Structure of Artocarpin Complexed with Me-alpha-Mannose==
-<StructureSection load='1j4u' size='340' side='right' caption='[[1j4u]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
+<StructureSection load='1j4u' size='340' side='right'caption='[[1j4u]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1j4u]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Artocarpus_integer Artocarpus integer]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J4U OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1J4U FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1j4u]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Artocarpus_integer Artocarpus integer]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J4U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1J4U FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MMA:O1-METHYL-MANNOSE'>MMA</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
-<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=AYA:N-ACETYLALANINE'>AYA</scene></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AYA:N-ACETYLALANINE'>AYA</scene>, <scene name='pdbligand=MMA:O1-METHYL-MANNOSE'>MMA</scene></td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1jac|1jac]], [[1j4s|1j4s]], [[1j4t|1j4t]]</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1j4u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j4u OCA], [https://pdbe.org/1j4u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1j4u RCSB], [https://www.ebi.ac.uk/pdbsum/1j4u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1j4u ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1j4u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j4u OCA], [http://pdbe.org/1j4u PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1j4u RCSB], [http://www.ebi.ac.uk/pdbsum/1j4u PDBsum]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q7M1T4_ARTIN Q7M1T4_ARTIN]
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j4/1j4u_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j4/1j4u_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1j4u ConSurf].
 <div style="clear:both"></div>
 <div style="background-color:#fffaf0;">
@@ Line 32: / Line 34: @@
 </StructureSection>
 [[Category: Artocarpus integer]]
-[[Category: Jeyaprakash, A A]]
+[[Category: Large Structures]]
-[[Category: Pratap, J V]]
+[[Category: Jeyaprakash AA]]
-[[Category: Rani, P G]]
+[[Category: Pratap JV]]
-[[Category: Sekar, K]]
+[[Category: Rani PG]]
-[[Category: Surolia, A]]
+[[Category: Sekar K]]
-[[Category: Vijayan, M]]
+[[Category: Surolia A]]
-[[Category: All beta]]
+[[Category: Vijayan M]]
-[[Category: Beta prism i fold]]
-[[Category: Greek key motif]]
-[[Category: Plant protein]]