1j26: Difference between revisions

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 ==Solution structure of a putative peptidyl-tRNA hydrolase domain in a mouse hypothetical protein==
-<StructureSection load='1j26' size='340' side='right' caption='[[1j26]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
+<StructureSection load='1j26' size='340' side='right'caption='[[1j26]]' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1j26]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J26 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1J26 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1j26]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J26 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1J26 FirstGlance]. <br>
-</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">NIA Mouse 15K cDNA Clone: H3024H01 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 Mus musculus])</td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1j26 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j26 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1j26 RCSB], [http://www.ebi.ac.uk/pdbsum/1j26 PDBsum], [http://www.topsan.org/Proteins/RSGI/1j26 TOPSAN]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1j26 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j26 OCA], [https://pdbe.org/1j26 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1j26 RCSB], [https://www.ebi.ac.uk/pdbsum/1j26 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1j26 ProSAT], [https://www.topsan.org/Proteins/RSGI/1j26 TOPSAN]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/ICT1_MOUSE ICT1_MOUSE]] Essential peptidyl-tRNA hydrolase component of the mitochondrial large ribosomal subunit. Acts as a codon-independent translation release factor that has lost all stop codon specificity and directs the termination of translation in mitochondrion, possibly in case of abortive elongation. May be involved in the hydrolysis of peptidyl-tRNAs that have been prematurely terminated and thus in the recycling of stalled mitochondrial ribosomes (By similarity).
+[https://www.uniprot.org/uniprot/ICT1_MOUSE ICT1_MOUSE] Essential peptidyl-tRNA hydrolase component of the mitochondrial large ribosomal subunit. Acts as a codon-independent translation release factor that has lost all stop codon specificity and directs the termination of translation in mitochondrion, possibly in case of abortive elongation. May be involved in the hydrolysis of peptidyl-tRNAs that have been prematurely terminated and thus in the recycling of stalled mitochondrial ribosomes (By similarity).
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j2/1j26_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j2/1j26_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1j26 ConSurf].
 <div style="clear:both"></div>
 <div style="background-color:#fffaf0;">
@@ Line 26: / Line 27: @@
 From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 </div>
+<div class="pdbe-citations 1j26" style="background-color:#fffaf0;"></div>
 == References ==
 <references/>
 __TOC__
 </StructureSection>
+[[Category: Large Structures]]
 [[Category: Mus musculus]]
-[[Category: Inoue, M]]
+[[Category: Inoue M]]
-[[Category: Kigawa, T]]
+[[Category: Kigawa T]]
-[[Category: Kobayashi, N]]
+[[Category: Kobayashi N]]
-[[Category: Koshiba, S]]
+[[Category: Koshiba S]]
-[[Category: Nameki, N]]
+[[Category: Nameki N]]
-[[Category: Structural genomic]]
+[[Category: Tochio N]]
-[[Category: Tochio, N]]
+[[Category: Yokoyama S]]
-[[Category: Yokoyama, S]]
-[[Category: Immature colon carcinoma transcript 1]]
-[[Category: Peptide chain release factor]]
-[[Category: Rf-1]]
-[[Category: Rsgi]]
-[[Category: The ggq motif]]
-[[Category: Translation]]