1cm5: Difference between revisions

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OCA

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 ==CRYSTAL STRUCTURE OF C418A,C419A MUTANT OF PFL FROM E.COLI==
-<StructureSection load='1cm5' size='340' side='right' caption='[[1cm5]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
+<StructureSection load='1cm5' size='340' side='right'caption='[[1cm5]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1cm5]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CM5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1CM5 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1cm5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CM5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1CM5 FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CO3:CARBONATE+ION'>CO3</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Formate_C-acetyltransferase Formate C-acetyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.1.54 2.3.1.54] </span></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CO3:CARBONATE+ION'>CO3</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1cm5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1cm5 OCA], [http://pdbe.org/1cm5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1cm5 RCSB], [http://www.ebi.ac.uk/pdbsum/1cm5 PDBsum]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1cm5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1cm5 OCA], [https://pdbe.org/1cm5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1cm5 RCSB], [https://www.ebi.ac.uk/pdbsum/1cm5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1cm5 ProSAT]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/PFLB_ECOLI PFLB_ECOLI]
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cm/1cm5_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cm/1cm5_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1cm5 ConSurf].
 <div style="clear:both"></div>
 <div style="background-color:#fffaf0;">
@@ Line 31: / Line 34: @@
 </StructureSection>
 [[Category: Escherichia coli]]
-[[Category: Formate C-acetyltransferase]]
+[[Category: Large Structures]]
-[[Category: Becker, A]]
+[[Category: Becker A]]
-[[Category: Fritz-Wolf, K]]
+[[Category: Fritz-Wolf K]]
-[[Category: Kabsch, W]]
+[[Category: Kabsch W]]
-[[Category: Knappe, J]]
+[[Category: Knappe J]]
-[[Category: Schultz, S]]
+[[Category: Schultz S]]
-[[Category: Wagner, A F.V]]
+[[Category: Wagner AFV]]
-[[Category: Glucose metabolism]]
-[[Category: Glycyl radical enzyme]]
-[[Category: Transferase]]