1ci0: Difference between revisions

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[[Image:1ci0.png|left|200px]]


{{STRUCTURE_1ci0|  PDB=1ci0  |  SCENE=  }}
==PNP OXIDASE FROM SACCHAROMYCES CEREVISIAE==
 
<StructureSection load='1ci0' size='340' side='right'caption='[[1ci0]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
===PNP OXIDASE FROM SACCHAROMYCES CEREVISIAE===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[1ci0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CI0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1CI0 FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
[[1ci0]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CI0 OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ci0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ci0 OCA], [https://pdbe.org/1ci0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ci0 RCSB], [https://www.ebi.ac.uk/pdbsum/1ci0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ci0 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/1ci0 TOPSAN]</span></td></tr>
[[Category: Pyridoxal 5'-phosphate synthase]]
</table>
== Function ==
[https://www.uniprot.org/uniprot/PDX3_YEAST PDX3_YEAST] Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).[HAMAP-Rule:MF_01629]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ci/1ci0_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ci0 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Almo, S C.]]
[[Category: Almo SC]]
[[Category: Burley, S K.]]
[[Category: Burley SK]]
[[Category: Gerchman, S E.]]
[[Category: Gerchman SE]]
[[Category: Graziano, V.]]
[[Category: Graziano V]]
[[Category: Kycia, H.]]
[[Category: Kycia H]]
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
[[Category: Ostrov DA]]
[[Category: Ostrov, D A.]]
[[Category: Shi W]]
[[Category: Shi, W.]]
[[Category: Studier B]]
[[Category: Studier, B.]]
[[Category: B6 metabolism]]
[[Category: New york sgx research center for structural genomic]]
[[Category: Nysgxrc]]
[[Category: Oxidase]]
[[Category: Oxidoreductase]]
[[Category: Protein structure initiative]]
[[Category: Psi]]
[[Category: Structural genomic]]

Latest revision as of 02:26, 28 December 2023

PNP OXIDASE FROM SACCHAROMYCES CEREVISIAEPNP OXIDASE FROM SACCHAROMYCES CEREVISIAE

Structural highlights

1ci0 is a 2 chain structure with sequence from Saccharomyces cerevisiae. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.7Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

PDX3_YEAST Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).[HAMAP-Rule:MF_01629]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1ci0, resolution 2.70Å

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OCA
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