1c51: Difference between revisions

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[[Image:1c51.png|left|200px]]


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==PHOTOSYNTHETIC REACTION CENTER AND CORE ANTENNA SYSTEM (TRIMERIC), ALPHA CARBON ONLY==
The line below this paragraph, containing "STRUCTURE_1c51", creates the "Structure Box" on the page.
<StructureSection load='1c51' size='340' side='right'caption='[[1c51]], [[Resolution|resolution]] 4.00&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1c51]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Synechococcus_elongatus Synechococcus elongatus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1C51 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1C51 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 4&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CLA:CHLOROPHYLL+A'>CLA</scene>, <scene name='pdbligand=PQN:PHYLLOQUINONE'>PQN</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>
{{STRUCTURE_1c51|  PDB=1c51  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1c51 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1c51 OCA], [https://pdbe.org/1c51 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1c51 RCSB], [https://www.ebi.ac.uk/pdbsum/1c51 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1c51 ProSAT]</span></td></tr>
</table>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
An improved electron density map of photosystem I (PSI) calculated at 4-A resolution yields a more detailed structural model of the stromal subunits PsaC, PsaD, and PsaE than previously reported. The NMR structure of the subunit PsaE of PSI from Synechococcus sp. PCC7002 (Falzone, C. J., Kao, Y.-H., Zhao, J., Bryant, D. A., and Lecomte, J. T. J. (1994) Biochemistry 33, 6052-6062) has been used as a model to interpret the region of the electron density map corresponding to this subunit. The spatial orientation with respect to other subunits is described as well as the possible interactions between the stromal subunits. A first model of PsaD consisting of a four-stranded beta-sheet and an alpha-helix is suggested, indicating that this subunit partly shields PsaC from the stromal side. In addition to the improvements on the stromal subunits, the structural model of the membrane-integral region of PSI is also extended. The current electron density map allows the identification of the N and C termini of the subunits PsaA and PsaB. The 11-transmembrane alpha-helices of these subunits can now be assigned uniquely to the hydrophobic segments identified by hydrophobicity analyses.


===PHOTOSYNTHETIC REACTION CENTER AND CORE ANTENNA SYSTEM (TRIMERIC), ALPHA CARBON ONLY===
Photosystem I, an improved model of the stromal subunits PsaC, PsaD, and PsaE.,Klukas O, Schubert WD, Jordan P, Krauss N, Fromme P, Witt HT, Saenger W J Biol Chem. 1999 Mar 12;274(11):7351-60. PMID:10066799<ref>PMID:10066799</ref>


From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
<div class="pdbe-citations 1c51" style="background-color:#fffaf0;"></div>


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==See Also==
The line below this paragraph, {{ABSTRACT_PUBMED_10066799}}, adds the Publication Abstract to the page
*[[Photosystem I 3D structures|Photosystem I 3D structures]]
(as it appears on PubMed at http://www.pubmed.gov), where 10066799 is the PubMed ID number.
== References ==
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<references/>
{{ABSTRACT_PUBMED_10066799}}
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</StructureSection>
==About this Structure==
[[Category: Large Structures]]
Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1C51 OCA].
[[Category: Synechococcus elongatus]]
 
[[Category: Fromme P]]
==Reference==
[[Category: Jordan P]]
Photosystem I, an improved model of the stromal subunits PsaC, PsaD, and PsaE., Klukas O, Schubert WD, Jordan P, Krauss N, Fromme P, Witt HT, Saenger W, J Biol Chem. 1999 Mar 12;274(11):7351-60. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10066799 10066799]
[[Category: Klukas O]]
[[Category: Fromme, P.]]
[[Category: Krauss N]]
[[Category: Jordan, P.]]
[[Category: Saenger W]]
[[Category: Klukas, O.]]
[[Category: Schubert WD]]
[[Category: Krauss, N.]]
[[Category: Witt HT]]
[[Category: Saenger, W.]]
[[Category: Schubert, W D.]]
[[Category: Witt, H T.]]
[[Category: Core- antenna light-harvesting system]]
[[Category: Helix-bundle membrane protein]]
[[Category: Oxygenic photosynthesis]]
[[Category: Photosynthesis]]
[[Category: Photosynthetic reaction center]]
[[Category: Thermophilic cyanobacterium]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jun 30 20:13:09 2008''

Latest revision as of 02:23, 28 December 2023

PHOTOSYNTHETIC REACTION CENTER AND CORE ANTENNA SYSTEM (TRIMERIC), ALPHA CARBON ONLYPHOTOSYNTHETIC REACTION CENTER AND CORE ANTENNA SYSTEM (TRIMERIC), ALPHA CARBON ONLY

Structural highlights

1c51 is a 8 chain structure with sequence from Synechococcus elongatus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 4Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Publication Abstract from PubMed

An improved electron density map of photosystem I (PSI) calculated at 4-A resolution yields a more detailed structural model of the stromal subunits PsaC, PsaD, and PsaE than previously reported. The NMR structure of the subunit PsaE of PSI from Synechococcus sp. PCC7002 (Falzone, C. J., Kao, Y.-H., Zhao, J., Bryant, D. A., and Lecomte, J. T. J. (1994) Biochemistry 33, 6052-6062) has been used as a model to interpret the region of the electron density map corresponding to this subunit. The spatial orientation with respect to other subunits is described as well as the possible interactions between the stromal subunits. A first model of PsaD consisting of a four-stranded beta-sheet and an alpha-helix is suggested, indicating that this subunit partly shields PsaC from the stromal side. In addition to the improvements on the stromal subunits, the structural model of the membrane-integral region of PSI is also extended. The current electron density map allows the identification of the N and C termini of the subunits PsaA and PsaB. The 11-transmembrane alpha-helices of these subunits can now be assigned uniquely to the hydrophobic segments identified by hydrophobicity analyses.

Photosystem I, an improved model of the stromal subunits PsaC, PsaD, and PsaE.,Klukas O, Schubert WD, Jordan P, Krauss N, Fromme P, Witt HT, Saenger W J Biol Chem. 1999 Mar 12;274(11):7351-60. PMID:10066799[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

See Also

References

  1. Klukas O, Schubert WD, Jordan P, Krauss N, Fromme P, Witt HT, Saenger W. Photosystem I, an improved model of the stromal subunits PsaC, PsaD, and PsaE. J Biol Chem. 1999 Mar 12;274(11):7351-60. PMID:10066799

1c51, resolution 4.00Å

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