4cq7: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
==The crystal structure of the allene oxide cyclase 2 from Arabidopsis thaliana with bound product - OPDA==
==The crystal structure of the allene oxide cyclase 2 from Arabidopsis thaliana with bound product - OPDA==
<StructureSection load='4cq7' size='340' side='right' caption='[[4cq7]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
<StructureSection load='4cq7' size='340' side='right'caption='[[4cq7]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4cq7]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4CQ7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4CQ7 FirstGlance]. <br>
<table><tr><td colspan='2'>[[4cq7]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4CQ7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4CQ7 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>, <scene name='pdbligand=WHW:9S,13R-12-OXOPHYTODIENOIC+ACID'>WHW</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4cq6|4cq6]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>, <scene name='pdbligand=WHW:9S,13R-12-OXOPHYTODIENOIC+ACID'>WHW</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Allene-oxide_cyclase Allene-oxide cyclase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.99.6 5.3.99.6] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4cq7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4cq7 OCA], [https://pdbe.org/4cq7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4cq7 RCSB], [https://www.ebi.ac.uk/pdbsum/4cq7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4cq7 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4cq7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4cq7 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4cq7 RCSB], [http://www.ebi.ac.uk/pdbsum/4cq7 PDBsum]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/AOC2_ARATH AOC2_ARATH]] Involved in the production of 12-oxo-phytodienoic acid (OPDA), a precursor of jasmonic acid.  
[https://www.uniprot.org/uniprot/AOC2_ARATH AOC2_ARATH] Involved in the production of 12-oxo-phytodienoic acid (OPDA), a precursor of jasmonic acid.
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Allene-oxide cyclase]]
[[Category: Arabidopsis thaliana]]
[[Category: Hofmann, E]]
[[Category: Large Structures]]
[[Category: Pollmann, S]]
[[Category: Hofmann E]]
[[Category: Terlecka, B A]]
[[Category: Pollmann S]]
[[Category: Allene oxide]]
[[Category: Terlecka BA]]
[[Category: Cyclization]]
[[Category: Isomerase]]
[[Category: Jasmonate]]
[[Category: Oxylipin]]

Latest revision as of 15:14, 20 December 2023

The crystal structure of the allene oxide cyclase 2 from Arabidopsis thaliana with bound product - OPDAThe crystal structure of the allene oxide cyclase 2 from Arabidopsis thaliana with bound product - OPDA

Structural highlights

4cq7 is a 3 chain structure with sequence from Arabidopsis thaliana. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.7Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

AOC2_ARATH Involved in the production of 12-oxo-phytodienoic acid (OPDA), a precursor of jasmonic acid.

4cq7, resolution 1.70Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA