4cf7: Difference between revisions

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 ==Crystal structure of adenylate kinase from Aquifex aeolicus with MgADP bound==
-<StructureSection load='4cf7' size='340' side='right' caption='[[4cf7]], [[Resolution|resolution]] 1.59&Aring;' scene=''>
+<StructureSection load='4cf7' size='340' side='right'caption='[[4cf7]], [[Resolution|resolution]] 1.59&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[4cf7]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4CF7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4CF7 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[4cf7]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4CF7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4CF7 FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.594&#8491;</td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Adenylate_kinase Adenylate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.4.3 2.7.4.3] </span></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4cf7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4cf7 OCA], [http://pdbe.org/4cf7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4cf7 RCSB], [http://www.ebi.ac.uk/pdbsum/4cf7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4cf7 ProSAT]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4cf7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4cf7 OCA], [https://pdbe.org/4cf7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4cf7 RCSB], [https://www.ebi.ac.uk/pdbsum/4cf7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4cf7 ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/KAD_AQUAE KAD_AQUAE]] Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. This small ubiquitous enzyme involved in the energy metabolism and nucleotide synthesis, is essential for maintenance and cell growth (By similarity).
+[https://www.uniprot.org/uniprot/KAD_AQUAE KAD_AQUAE] Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. This small ubiquitous enzyme involved in the energy metabolism and nucleotide synthesis, is essential for maintenance and cell growth (By similarity).
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 21: / Line 21: @@
 ==See Also==
-*[[Adenylate kinase|Adenylate kinase]]
+*[[Adenylate kinase 3D structures|Adenylate kinase 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Adenylate kinase]]
+[[Category: Aquifex aeolicus]]
-[[Category: Agafonov, R V]]
+[[Category: Large Structures]]
-[[Category: Cho, Y J]]
+[[Category: Agafonov RV]]
-[[Category: Hagan, M F]]
+[[Category: Cho Y-J]]
-[[Category: Kern, D]]
+[[Category: Hagan MF]]
-[[Category: Kerns, S J]]
+[[Category: Kern D]]
-[[Category: Kutter, S]]
+[[Category: Kerns SJ]]
-[[Category: Murphy, P N]]
+[[Category: Kutter S]]
-[[Category: Otten, R]]
+[[Category: Murphy PN]]
-[[Category: Pachov, D V]]
+[[Category: Otten R]]
-[[Category: Phung, L A]]
+[[Category: Pachov DV]]
-[[Category: Pontiggia, F]]
+[[Category: Phung LA]]
-[[Category: Thai, V]]
+[[Category: Pontiggia F]]
-[[Category: Nucleotide-binding]]
+[[Category: Thai V]]
-[[Category: Phosphoryl transfer]]
-[[Category: Transferase]]