4bt6: Difference between revisions

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==acetolactate decarboxylase with a bound glycerol==
==acetolactate decarboxylase with a bound glycerol==
<StructureSection load='4bt6' size='340' side='right' caption='[[4bt6]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
<StructureSection load='4bt6' size='340' side='right'caption='[[4bt6]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4bt6]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_8246 Atcc 8246]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BT6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4BT6 FirstGlance]. <br>
<table><tr><td colspan='2'>[[4bt6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Brevibacillus_brevis Brevibacillus brevis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BT6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4BT6 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4bt2|4bt2]], [[4bt3|4bt3]], [[4bt4|4bt4]], [[4bt5|4bt5]], [[4bt7|4bt7]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Acetolactate_decarboxylase Acetolactate decarboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.5 4.1.1.5] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4bt6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4bt6 OCA], [https://pdbe.org/4bt6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4bt6 RCSB], [https://www.ebi.ac.uk/pdbsum/4bt6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4bt6 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4bt6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4bt6 OCA], [http://pdbe.org/4bt6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4bt6 RCSB], [http://www.ebi.ac.uk/pdbsum/4bt6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4bt6 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/ALDC_BREBE ALDC_BREBE]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Acetolactate decarboxylase]]
[[Category: Brevibacillus brevis]]
[[Category: Atcc 8246]]
[[Category: Large Structures]]
[[Category: Fulop, V]]
[[Category: A Marlow V]]
[[Category: Marlow, V A]]
[[Category: Fulop V]]
[[Category: Najmudin, S]]
[[Category: Najmudin S]]
[[Category: Rea, D]]
[[Category: Rea D]]
[[Category: Wills, M]]
[[Category: Wills M]]
[[Category: Acetoin biosynthesis]]
[[Category: Bifunctional enzyme]]
[[Category: Lyase]]
[[Category: Stereoselective decarboxylation]]

Latest revision as of 14:57, 20 December 2023

acetolactate decarboxylase with a bound glycerolacetolactate decarboxylase with a bound glycerol

Structural highlights

4bt6 is a 1 chain structure with sequence from Brevibacillus brevis. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.6Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

ALDC_BREBE

Publication Abstract from PubMed

Acetolactate decarboxylase catalyzes the conversion of both enantiomers of acetolactate to the (R)-enantiomer of acetoin, via a mechanism that has been shown to involve a prior rearrangement of the non-natural (R)-enantiomer substrate to the natural (S)-enantiomer. In this paper, a series of crystal structures of ALDC complex with designed transition state mimics are reported. These structures, coupled with inhibition studies and site-directed mutagenesis provide an improved understanding of the molecular processes involved in the stereoselective decarboxylation/protonation events. A mechanism for the transformation of each enantiomer of acetolactate is proposed.

Structure and Mechanism of Acetolactate Decarboxylase.,Marlow VA, Rea D, Najmudin S, Wills M, Fulop V ACS Chem Biol. 2013 Aug 28. PMID:23985082[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Marlow VA, Rea D, Najmudin S, Wills M, Fulop V. Structure and Mechanism of Acetolactate Decarboxylase. ACS Chem Biol. 2013 Aug 28. PMID:23985082 doi:10.1021/cb400429h

4bt6, resolution 1.60Å

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