4bie: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
 ==Crystal Structures of Ask1-inhibitor Complexes==
-<StructureSection load='4bie' size='340' side='right' caption='[[4bie]], [[Resolution|resolution]] 2.36&Aring;' scene=''>
+<StructureSection load='4bie' size='340' side='right'caption='[[4bie]], [[Resolution|resolution]] 2.36&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[4bie]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BIE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4BIE FirstGlance]. <br>
+<table><tr><td colspan='2'>[[4bie]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BIE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4BIE FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=IE6:N-(2-AMINOETHYL)-5-{2-METHYL-1H-PYRROLO[2,3-B]PYRIDIN-4-YL}THIOPHENE-2-SULFONAMIDE'>IE6</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.36&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4bf2|4bf2]], [[4bhn|4bhn]], [[4bib|4bib]], [[4bic|4bic]], [[4bid|4bid]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=IE6:N-(2-AMINOETHYL)-5-{2-METHYL-1H-PYRROLO[2,3-B]PYRIDIN-4-YL}THIOPHENE-2-SULFONAMIDE'>IE6</scene></td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Mitogen-activated_protein_kinase_kinase_kinase Mitogen-activated protein kinase kinase kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.11.25 2.7.11.25] </span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4bie FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4bie OCA], [https://pdbe.org/4bie PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4bie RCSB], [https://www.ebi.ac.uk/pdbsum/4bie PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4bie ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4bie FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4bie OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4bie RCSB], [http://www.ebi.ac.uk/pdbsum/4bie PDBsum]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/M3K5_HUMAN M3K5_HUMAN] Serine/threonine kinase which acts as an essential component of the MAP kinase signal transduction pathway. Plays an important role in the cascades of cellular responses evoked by changes in the environment. Mediates signaling for determination of cell fate such as differentiation and survival. Plays a crucial role in the apoptosis signal transduction pathway through mitochondria-dependent caspase activation. MAP3K5/ASK1 is required for the innate immune response, which is essential for host defense against a wide range of pathogens. Mediates signal transduction of various stressors like oxidative stress as well as by receptor-mediated inflammatory signals, such as the tumor necrosis factor (TNF) or lipopolysaccharide (LPS). Once activated, acts as an upstream activator of the MKK/JNK signal transduction cascade and the p38 MAPK signal transduction cascade through the phosphorylation and activation of several MAP kinase kinases like MAP2K4/SEK1, MAP2K3/MKK3, MAP2K6/MKK6 and MAP2K7/MKK7. These MAP2Ks in turn activate p38 MAPKs and c-jun N-terminal kinases (JNKs). Both p38 MAPK and JNKs control the transcription factors activator protein-1 (AP-1).<ref>PMID:8940179</ref> <ref>PMID:8974401</ref> <ref>PMID:9564042</ref> <ref>PMID:9774977</ref> <ref>PMID:10411906</ref> <ref>PMID:10849426</ref> <ref>PMID:10688666</ref> <ref>PMID:11689443</ref> <ref>PMID:11029458</ref> <ref>PMID:11154276</ref> <ref>PMID:14749717</ref> <ref>PMID:11920685</ref> <ref>PMID:12697749</ref> <ref>PMID:15023544</ref> <ref>PMID:14688258</ref> <ref>PMID:16129676</ref> <ref>PMID:17220297</ref>
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 16: / Line 18: @@
 From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 </div>
+<div class="pdbe-citations 4bie" style="background-color:#fffaf0;"></div>
 ==See Also==
@@ Line 24: / Line 27: @@
 </StructureSection>
 [[Category: Homo sapiens]]
-[[Category: Mitogen-activated protein kinase kinase kinase]]
+[[Category: Large Structures]]
-[[Category: Blunt, M]]
+[[Category: Blunt M]]
-[[Category: Craggs, P]]
+[[Category: Craggs P]]
-[[Category: Hardwick, P]]
+[[Category: Hardwick P]]
-[[Category: Hobbs, C I]]
+[[Category: Hobbs CI]]
-[[Category: Rowland, P]]
+[[Category: Rowland P]]
-[[Category: Shillings, A]]
+[[Category: Shillings A]]
-[[Category: Singh, O]]
+[[Category: Singh O]]
-[[Category: Skarzynski, T]]
+[[Category: Skarzynski T]]
-[[Category: Smith, K J]]
+[[Category: Smith KJ]]
-[[Category: Tanner, R]]
+[[Category: Tanner R]]
-[[Category: Wall, I]]
+[[Category: Wall I]]
-[[Category: Witty, D R]]
+[[Category: Witty DR]]
-[[Category: Structure based desgin]]
-[[Category: Transferase]]