4b4x: Difference between revisions
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==Crystal structure of a complex between Actinomadura R39 DD-peptidase and a sulfonamide boronate inhibitor== | ==Crystal structure of a complex between Actinomadura R39 DD-peptidase and a sulfonamide boronate inhibitor== | ||
<StructureSection load='4b4x' size='340' side='right' caption='[[4b4x]], [[Resolution|resolution]] 2.65Å' scene=''> | <StructureSection load='4b4x' size='340' side='right'caption='[[4b4x]], [[Resolution|resolution]] 2.65Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[4b4x]] is a 4 chain structure with sequence from [ | <table><tr><td colspan='2'>[[4b4x]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Actinomadura_sp._R39 Actinomadura sp. R39]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4B4X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4B4X FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HQZ:TRIHYDROXY{(1S)-1-[(METHYLSULFONYL)AMINO]ETHYL}BORATE(1-)'>HQZ</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.65Å</td></tr> | ||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HQZ:TRIHYDROXY{(1S)-1-[(METHYLSULFONYL)AMINO]ETHYL}BORATE(1-)'>HQZ</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4b4x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4b4x OCA], [https://pdbe.org/4b4x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4b4x RCSB], [https://www.ebi.ac.uk/pdbsum/4b4x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4b4x ProSAT]</span></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | |||
</table> | </table> | ||
== Function == | == Function == | ||
[ | [https://www.uniprot.org/uniprot/DAC_ACTSP DAC_ACTSP] Removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors. | ||
==See Also== | |||
*[[Carboxypeptidase 3D structures|Carboxypeptidase 3D structures]] | |||
*[[Penicillin-binding protein 3D structures|Penicillin-binding protein 3D structures]] | |||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Actinomadura sp. R39]] | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: Cannella | [[Category: Cannella SE]] | ||
[[Category: Charlier | [[Category: Charlier P]] | ||
[[Category: Herman | [[Category: Herman R]] | ||
[[Category: Kerff | [[Category: Kerff F]] | ||
[[Category: Rocaboy | [[Category: Rocaboy M]] | ||
[[Category: Sauvage | [[Category: Sauvage E]] | ||
Latest revision as of 14:43, 20 December 2023
Crystal structure of a complex between Actinomadura R39 DD-peptidase and a sulfonamide boronate inhibitorCrystal structure of a complex between Actinomadura R39 DD-peptidase and a sulfonamide boronate inhibitor
Structural highlights
FunctionDAC_ACTSP Removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors. See Also |
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