4a64: Difference between revisions

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-[[Image:4a64.jpg|left|200px]]
-<!--
+==Crystal structure of the N-terminal domain of human Cul4B at 2.57A resolution==
-The line below this paragraph, containing "STRUCTURE_4a64", creates the "Structure Box" on the page.
+<StructureSection load='4a64' size='340' side='right'caption='[[4a64]], [[Resolution|resolution]] 2.57&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[4a64]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4A64 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4A64 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.57&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
-{{STRUCTURE_4a64|  PDB=4a64  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4a64 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4a64 OCA], [https://pdbe.org/4a64 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4a64 RCSB], [https://www.ebi.ac.uk/pdbsum/4a64 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4a64 ProSAT]</span></td></tr>
+</table>
+== Disease ==
+[https://www.uniprot.org/uniprot/CUL4B_HUMAN CUL4B_HUMAN] Defects in CUL4B are the cause of mental retardation, X-linked, syndromic, 15 (MRXS15) [MIM:[https://omim.org/entry/300354 300354]. A syndromic form of X-linked mental retardation characterized by severe intellectual deficit associated with short stature, craniofacial dysmorphism, small testes, muscle wasting in lower legs, kyphosis, joint hyperextensibility, pes cavus, small feet, and abnormalities of the toes. Additional neurologic manifestations include speech delay and impairment, tremor, seizures, gait ataxia, hyperactivity and decreased attention span.<ref>PMID:17273978</ref> <ref>PMID:20002452</ref> <ref>PMID:17236139</ref> <ref>PMID:19377476</ref>
+== Function ==
+[https://www.uniprot.org/uniprot/CUL4B_HUMAN CUL4B_HUMAN] Core component of multiple cullin-RING-based E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. The functional specificity of the E3 ubiquitin-protein ligase complex depends on the variable substrate recognition subunit. CUL4B may act within the complex as a scaffold protein, contributing to catalysis through positioning of the substrate and the ubiquitin-conjugating enzyme. Plays a role as part of the E3 ubiquitin-protein ligase complex in polyubiquitination of CDT1, histone H2A, histone H3 and histone H4 in response to radiation-induced DNA damage. Targeted to UV damaged chromatin by DDB2 and may be important for DNA repair and DNA replication. Required for ubiquitination of cyclin E, and consequently, normal G1 cell cycle progression. Regulates the mammalian target-of-rapamycin (mTOR) pathway involved in control of cell growth, size and metabolism. Specific CUL4B regulation of the mTORC1-mediated pathway is dependent upon 26S proteasome function and requires interaction between CUL4B and MLST8.<ref>PMID:14578910</ref> <ref>PMID:16322693</ref> <ref>PMID:16678110</ref> <ref>PMID:18593899</ref> <ref>PMID:18235224</ref> <ref>PMID:19801544</ref>
-===Crystal structure of the N-terminal domain of human Cul4B at 2.57A resolution===
+==See Also==
+*[[Cullin 3D structures|Cullin 3D structures]]
+== References ==
-==About this Structure==
+<references/>
-[[4a64]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4A64 OCA].
+__TOC__
+</StructureSection>
 [[Category: Homo sapiens]]
-[[Category: Arrowsmith, C H.]]
+[[Category: Large Structures]]
-[[Category: Ayinampudi, V.]]
+[[Category: Arrowsmith CH]]
-[[Category: Bountra, C.]]
+[[Category: Ayinampudi V]]
-[[Category: Bullock, A.]]
+[[Category: Bountra C]]
-[[Category: Cooper, C.]]
+[[Category: Bullock A]]
-[[Category: Delft, F Von.]]
+[[Category: Cooper C]]
-[[Category: Edwards, A.]]
+[[Category: Edwards A]]
-[[Category: Guo, K.]]
+[[Category: Guo K]]
-[[Category: Krojer, T.]]
+[[Category: Krojer T]]
-[[Category: Muniz, J R.C.]]
+[[Category: Muniz JRC]]
-[[Category: Vollmar, M.]]
+[[Category: Vollmar M]]
-[[Category: Weigelt, J.]]
+[[Category: Weigelt J]]
-[[Category: Cell cycle]]
+[[Category: Von Delft F]]