2ylc: Difference between revisions

No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:


==STRUCTURE OF SALMONELLA TYPHIMURIUM HFQ IN COMPLEX WITH U6 RNA==
==Structure of Salmonella typhimurium Hfq in complex with U6 RNA==
<StructureSection load='2ylc' size='340' side='right' caption='[[2ylc]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
<StructureSection load='2ylc' size='340' side='right'caption='[[2ylc]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2ylc]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Salty Salty]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YLC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YLC FirstGlance]. <br>
<table><tr><td colspan='2'>[[2ylc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YLC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YLC FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SCN:THIOCYANATE+ION'>SCN</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2ylb|2ylb]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SCN:THIOCYANATE+ION'>SCN</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ylc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ylc OCA], [http://pdbe.org/2ylc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ylc RCSB], [http://www.ebi.ac.uk/pdbsum/2ylc PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2ylc ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ylc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ylc OCA], [https://pdbe.org/2ylc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ylc RCSB], [https://www.ebi.ac.uk/pdbsum/2ylc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ylc ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/HFQ_SALTY HFQ_SALTY]] RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs (By similarity). Plays a central regulatory role in the microbial response to space flight conditions. Is essential for virulence and is required for efficient invasion of non-phagocytic cells.[HAMAP-Rule:MF_00436]<ref>PMID:17163975</ref>
[https://www.uniprot.org/uniprot/HFQ_SALTY HFQ_SALTY] RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs (By similarity). Plays a central regulatory role in the microbial response to space flight conditions. Is essential for virulence and is required for efficient invasion of non-phagocytic cells.[HAMAP-Rule:MF_00436]<ref>PMID:17163975</ref>  
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 19: Line 19:
</div>
</div>
<div class="pdbe-citations 2ylc" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 2ylc" style="background-color:#fffaf0;"></div>
==See Also==
*[[Protein Hfq 3D structures|Protein Hfq 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Salty]]
[[Category: Large Structures]]
[[Category: Sauer, E]]
[[Category: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]]
[[Category: Weichenrieder, O]]
[[Category: Sauer E]]
[[Category: Lsm protein]]
[[Category: Weichenrieder O]]
[[Category: Rna chaperone]]
[[Category: Rna-binding protein]]

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA