2xhh: Difference between revisions

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-==CIRCULAR PERMUTATION PROVIDES AN EVOLUTIONARY LINK BETWEEN TWO FAMILIES OF CALCIUM-DEPENDENT CARBOHYDRATE BINDING MODULES==
-<StructureSection load='2xhh' size='340' side='right' caption='[[2xhh]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
+==Circular permutation provides an evolutionary link between two families of calcium-dependent carbohydrate binding modules==
+<StructureSection load='2xhh' size='340' side='right'caption='[[2xhh]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[2xhh]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Cellvibrio_japonicus Cellvibrio japonicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XHH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2XHH FirstGlance]. <br>
+<table><tr><td colspan='2'>[[2xhh]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cellvibrio_japonicus Cellvibrio japonicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XHH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2XHH FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=LMR:(2S)-2-HYDROXYBUTANEDIOIC+ACID'>LMR</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2xhj|2xhj]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=LMR:(2S)-2-HYDROXYBUTANEDIOIC+ACID'>LMR</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2xhh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xhh OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2xhh RCSB], [http://www.ebi.ac.uk/pdbsum/2xhh PDBsum]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2xhh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xhh OCA], [https://pdbe.org/2xhh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2xhh RCSB], [https://www.ebi.ac.uk/pdbsum/2xhh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2xhh ProSAT]</span></td></tr>
 </table>
 == Evolutionary Conservation ==
@@ Line 11: / Line 12: @@
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xh/2xhh_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xh/2xhh_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2xhh ConSurf].
 <div style="clear:both"></div>
 <div style="background-color:#fffaf0;">
@@ Line 25: / Line 26: @@
 From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 </div>
+<div class="pdbe-citations 2xhh" style="background-color:#fffaf0;"></div>
 == References ==
 <references/>
@@ Line 30: / Line 32: @@
 </StructureSection>
 [[Category: Cellvibrio japonicus]]
-[[Category: Bolam, D N]]
+[[Category: Large Structures]]
-[[Category: Davies, G J]]
+[[Category: Bolam DN]]
-[[Category: Flint, J E]]
+[[Category: Davies GJ]]
-[[Category: Gilbert, H J]]
+[[Category: Flint JE]]
-[[Category: Liu, Z]]
+[[Category: Gilbert HJ]]
-[[Category: Montanier, C]]
+[[Category: Liu Z]]
-[[Category: Nurizzo, D]]
+[[Category: Montanier C]]
-[[Category: Ratnaparkhe, S]]
+[[Category: Nurizzo D]]
-[[Category: Roberts, S M]]
+[[Category: Ratnaparkhe S]]
-[[Category: Rogowski, A]]
+[[Category: Roberts SM]]
-[[Category: Turkenburg, J P]]
+[[Category: Rogowski A]]
-[[Category: Weiner, D]]
+[[Category: Turkenburg JP]]
-[[Category: Xie, H]]
+[[Category: Weiner D]]
-[[Category: Beta glucan]]
+[[Category: Xie H]]
-[[Category: Cellulose]]
-[[Category: Galactan]]
-[[Category: Lectin]]
-[[Category: Sugar binding protein]]
-[[Category: Xylan]]