2x2p: Difference between revisions

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OCA

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-[[Image:2x2p.png|left|200px]]
-<!--
+==The flavoprotein NrdI from Bacillus cereus with the initially semiquinone FMN cofactor in an intermediate radiation reduced state==
-The line below this paragraph, containing "STRUCTURE_2x2p", creates the "Structure Box" on the page.
+<StructureSection load='2x2p' size='340' side='right'caption='[[2x2p]], [[Resolution|resolution]] 1.15&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2x2p]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_cereus_ATCC_14579 Bacillus cereus ATCC 14579]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2X2P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2X2P FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.15&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CAC:CACODYLATE+ION'>CAC</scene>, <scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-{{STRUCTURE_2x2p|  PDB=2x2p  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2x2p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2x2p OCA], [https://pdbe.org/2x2p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2x2p RCSB], [https://www.ebi.ac.uk/pdbsum/2x2p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2x2p ProSAT]</span></td></tr>
+</table>
-===THE FLAVOPROTEIN NRDI FROM BACILLUS CEREUS WITH THE INITIALLY SEMIQUINONE FMN COFACTOR IN AN INTERMEDIATE RADIATION REDUCED STATE===
+== Function ==
+[https://www.uniprot.org/uniprot/Q81G57_BACCR Q81G57_BACCR] Probably involved in ribonucleotide reductase function (By similarity).[SAAS:SAAS004465_004_003068]
+== Evolutionary Conservation ==
-==About this Structure==
+[[Image:Consurf_key_small.gif|200px|right]]
-[[2x2p]] is a 1 chain structure of [[Flavodoxin]] with sequence from [http://en.wikipedia.org/wiki/Bacillus_cereus Bacillus cereus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2X2P OCA].
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/x2/2x2p_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2x2p ConSurf].
+<div style="clear:both"></div>
 ==See Also==
-*[[Flavodoxin]]
+*[[Flavodoxin 3D structures|Flavodoxin 3D structures]]
+__TOC__
-==Reference==
+</StructureSection>
-<ref group="xtra">PMID:020187055</ref><references group="xtra"/>
+[[Category: Bacillus cereus ATCC 14579]]
-[[Category: Bacillus cereus]]
+[[Category: Large Structures]]
-[[Category: Andersson, K K.]]
+[[Category: Andersson KK]]
-[[Category: Hersleth, H P.]]
+[[Category: Hersleth HP]]
-[[Category: Rohr, A K.]]
+[[Category: Rohr AK]]
-[[Category: Electron transfer]]
-[[Category: Flavodoxin]]
-[[Category: Flavoprotein]]
-[[Category: Ribonucleotide reductase]]