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==Solution NMR structure of ribosome modulation factor VP1593 from Vibrio parahaemolyticus. Northeast Structural Genomics target VpR55== | ==Solution NMR structure of ribosome modulation factor VP1593 from Vibrio parahaemolyticus. Northeast Structural Genomics target VpR55== | ||
<StructureSection load='2jrm' size='340' side='right' caption='[[2jrm | <StructureSection load='2jrm' size='340' side='right'caption='[[2jrm]]' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2jrm]] is a 1 chain structure with sequence from [ | <table><tr><td colspan='2'>[[2jrm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_parahaemolyticus_RIMD_2210633 Vibrio parahaemolyticus RIMD 2210633]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JRM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JRM FirstGlance]. <br> | ||
</td></tr><tr><td class="sblockLbl"><b>[[ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> | ||
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jrm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jrm OCA], [https://pdbe.org/2jrm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jrm RCSB], [https://www.ebi.ac.uk/pdbsum/2jrm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jrm ProSAT], [https://www.topsan.org/Proteins/NESGC/2jrm TOPSAN]</span></td></tr> | ||
<table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/Q87PC4_VIBPA Q87PC4_VIBPA] During stationary phase, converts 70S ribosomes to an inactive dimeric form (100S ribosomes).[HAMAP-Rule:MF_00919] | |||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jr/2jrm_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jr/2jrm_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2jrm ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Vibrio parahaemolyticus]] | [[Category: Large Structures]] | ||
[[Category: Acton | [[Category: Vibrio parahaemolyticus RIMD 2210633]] | ||
[[Category: Baran | [[Category: Acton TB]] | ||
[[Category: Cunningham | [[Category: Baran MC]] | ||
[[Category: Jiang | [[Category: Cunningham K]] | ||
[[Category: Liu | [[Category: Jiang M]] | ||
[[Category: Ma | [[Category: Liu J]] | ||
[[Category: Montelione | [[Category: Ma L]] | ||
[[Category: Montelione GT]] | |||
[[Category: Owens | [[Category: Owens L]] | ||
[[Category: Rossi | [[Category: Rossi P]] | ||
[[Category: Rost | [[Category: Rost B]] | ||
[[Category: Swapna | [[Category: Swapna G]] | ||
[[Category: Tang | [[Category: Tang Y]] | ||
[[Category: Wang | [[Category: Wang H]] | ||
[[Category: Xiao | [[Category: Xiao R]] | ||
Latest revision as of 13:11, 20 December 2023
Solution NMR structure of ribosome modulation factor VP1593 from Vibrio parahaemolyticus. Northeast Structural Genomics target VpR55Solution NMR structure of ribosome modulation factor VP1593 from Vibrio parahaemolyticus. Northeast Structural Genomics target VpR55
Structural highlights
FunctionQ87PC4_VIBPA During stationary phase, converts 70S ribosomes to an inactive dimeric form (100S ribosomes).[HAMAP-Rule:MF_00919] Evolutionary Conservation Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf. |
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