2jrm: Difference between revisions

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-[[Image:2jrm.png|left|200px]]
-{{STRUCTURE_2jrm|  PDB=2jrm  |  SCENE=  }}
+==Solution NMR structure of ribosome modulation factor VP1593 from Vibrio parahaemolyticus. Northeast Structural Genomics target VpR55==
+<StructureSection load='2jrm' size='340' side='right'caption='[[2jrm]]' scene=''>
-===Solution NMR structure of ribosome modulation factor VP1593 from Vibrio parahaemolyticus. Northeast Structural Genomics target VpR55===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[2jrm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_parahaemolyticus_RIMD_2210633 Vibrio parahaemolyticus RIMD 2210633]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JRM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JRM FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-==About this Structure==
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jrm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jrm OCA], [https://pdbe.org/2jrm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jrm RCSB], [https://www.ebi.ac.uk/pdbsum/2jrm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jrm ProSAT], [https://www.topsan.org/Proteins/NESGC/2jrm TOPSAN]</span></td></tr>
-[[2jrm]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibrio_parahaemolyticus Vibrio parahaemolyticus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JRM OCA].
+</table>
-[[Category: Vibrio parahaemolyticus]]
+== Function ==
-[[Category: Acton, T B.]]
+[https://www.uniprot.org/uniprot/Q87PC4_VIBPA Q87PC4_VIBPA] During stationary phase, converts 70S ribosomes to an inactive dimeric form (100S ribosomes).[HAMAP-Rule:MF_00919]
-[[Category: Baran, M C.]]
+== Evolutionary Conservation ==
-[[Category: Cunningham, K.]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: Jiang, M.]]
+Check<jmol>
-[[Category: Liu, J.]]
+  <jmolCheckbox>
-[[Category: Ma, L.]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jr/2jrm_consurf.spt"</scriptWhenChecked>
-[[Category: Montelione, G T.]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: NESG, Northeast Structural Genomics Consortium.]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Owens, L.]]
+  </jmolCheckbox>
-[[Category: Rossi, P.]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2jrm ConSurf].
-[[Category: Rost, B.]]
+<div style="clear:both"></div>
-[[Category: Swapna, G.]]
+__TOC__
-[[Category: Tang, Y.]]
+</StructureSection>
-[[Category: Wang, H.]]
+[[Category: Large Structures]]
-[[Category: Xiao, R.]]
+[[Category: Vibrio parahaemolyticus RIMD 2210633]]
-[[Category: Nesg]]
+[[Category: Acton TB]]
-[[Category: Northeast structural genomics consortium]]
+[[Category: Baran MC]]
-[[Category: Protein structure initiative]]
+[[Category: Cunningham K]]
-[[Category: Psi-2]]
+[[Category: Jiang M]]
-[[Category: Solution nmr structure]]
+[[Category: Liu J]]
-[[Category: Structural genomic]]
+[[Category: Ma L]]
-[[Category: Unknown function]]
+[[Category: Montelione GT]]
+[[Category: Owens L]]
+[[Category: Rossi P]]
+[[Category: Rost B]]
+[[Category: Swapna G]]
+[[Category: Tang Y]]
+[[Category: Wang H]]
+[[Category: Xiao R]]