5oex: Difference between revisions

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==Complex with iodine ion for thiocyanate dehydrogenase from Thioalkalivibrio paradoxus==
==Complex with iodine ion for thiocyanate dehydrogenase from Thioalkalivibrio paradoxus==
<StructureSection load='5oex' size='340' side='right' caption='[[5oex]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='5oex' size='340' side='right'caption='[[5oex]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5oex]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Thioalkalivibrio_paradoxus_arh_1 Thioalkalivibrio paradoxus arh 1]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=5f30 5f30]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5OEX OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5OEX FirstGlance]. <br>
<table><tr><td colspan='2'>[[5oex]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thioalkalivibrio_paradoxus_ARh_1 Thioalkalivibrio paradoxus ARh 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5OEX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5OEX FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=P4G:1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE'>P4G</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">THITH_13335 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=713585 Thioalkalivibrio paradoxus ARh 1])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=P4G:1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE'>P4G</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5oex FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5oex OCA], [http://pdbe.org/5oex PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5oex RCSB], [http://www.ebi.ac.uk/pdbsum/5oex PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5oex ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5oex FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5oex OCA], [https://pdbe.org/5oex PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5oex RCSB], [https://www.ebi.ac.uk/pdbsum/5oex PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5oex ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/W0DP94_9GAMM W0DP94_9GAMM]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Thioalkalivibrio paradoxus arh 1]]
[[Category: Large Structures]]
[[Category: Polyakov, K M]]
[[Category: Thioalkalivibrio paradoxus ARh 1]]
[[Category: Popov, V O]]
[[Category: Polyakov KM]]
[[Category: Tikhonova, T V]]
[[Category: Popov VO]]
[[Category: Tsallagov, S I]]
[[Category: Tikhonova TV]]
[[Category: Copper center]]
[[Category: Tsallagov SI]]
[[Category: Oxidoreductase]]
[[Category: Thiocyanate dehydrogenase]]

Latest revision as of 19:47, 13 December 2023

Complex with iodine ion for thiocyanate dehydrogenase from Thioalkalivibrio paradoxusComplex with iodine ion for thiocyanate dehydrogenase from Thioalkalivibrio paradoxus

Structural highlights

5oex is a 4 chain structure with sequence from Thioalkalivibrio paradoxus ARh 1. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2Å
Ligands:, , , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

W0DP94_9GAMM

5oex, resolution 2.00Å

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OCA