2vzc: Difference between revisions

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 ==Crystal structure of the C-terminal calponin homology domain of alpha parvin==
-<StructureSection load='2vzc' size='340' side='right' caption='[[2vzc]], [[Resolution|resolution]] 1.05&Aring;' scene=''>
+<StructureSection load='2vzc' size='340' side='right'caption='[[2vzc]], [[Resolution|resolution]] 1.05&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[2vzc]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VZC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2VZC FirstGlance]. <br>
+<table><tr><td colspan='2'>[[2vzc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VZC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VZC FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.05&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2vzd|2vzd]], [[2vzi|2vzi]], [[2vzg|2vzg]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2vzc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vzc OCA], [http://pdbe.org/2vzc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2vzc RCSB], [http://www.ebi.ac.uk/pdbsum/2vzc PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2vzc ProSAT]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vzc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vzc OCA], [https://pdbe.org/2vzc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vzc RCSB], [https://www.ebi.ac.uk/pdbsum/2vzc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vzc ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/PARVA_HUMAN PARVA_HUMAN]] Plays a role in sarcomere organization and in smooth muscle cell contraction. Required for normal development of the embryonic cardiovascular system, and for normal septation of the heart outflow tract. Plays a role in sprouting angiogenesis and is required for normal adhesion of vascular smooth muscle cells to endothelial cells during blood vessel development (By similarity). Plays a role in the reorganization of the actin cytoskeleton, formation of lamellipodia and ciliogenesis. Plays a role in the establishement of cell polarity, cell adhesion, cell spreading, and directed cell migration.<ref>PMID:11331308</ref> <ref>PMID:11134073</ref> <ref>PMID:15284246</ref> <ref>PMID:20393563</ref>
+[https://www.uniprot.org/uniprot/PARVA_HUMAN PARVA_HUMAN] Plays a role in sarcomere organization and in smooth muscle cell contraction. Required for normal development of the embryonic cardiovascular system, and for normal septation of the heart outflow tract. Plays a role in sprouting angiogenesis and is required for normal adhesion of vascular smooth muscle cells to endothelial cells during blood vessel development (By similarity). Plays a role in the reorganization of the actin cytoskeleton, formation of lamellipodia and ciliogenesis. Plays a role in the establishement of cell polarity, cell adhesion, cell spreading, and directed cell migration.<ref>PMID:11331308</ref> <ref>PMID:11134073</ref> <ref>PMID:15284246</ref> <ref>PMID:20393563</ref>
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
@@ Line 31: / Line 31: @@
 ==See Also==
-*[[Alpha-parvin|Alpha-parvin]]
+*[[Parvin|Parvin]]
+*[[Parvin 3D structures|Parvin 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Human]]
+[[Category: Homo sapiens]]
-[[Category: Campbell, I D]]
+[[Category: Large Structures]]
-[[Category: Hoellerer, M K]]
+[[Category: Campbell ID]]
-[[Category: Lorenz, S]]
+[[Category: Hoellerer MK]]
-[[Category: Lowe, E D]]
+[[Category: Lorenz S]]
-[[Category: Noble, M E.M]]
+[[Category: Lowe ED]]
-[[Category: Vakonakis, I]]
+[[Category: Noble MEM]]
-[[Category: Actin-binding]]
+[[Category: Vakonakis I]]
-[[Category: Alternative splicing]]
-[[Category: Calponin homology domain]]
-[[Category: Cell adhesion]]
-[[Category: Cell junction]]
-[[Category: Cell membrane]]
-[[Category: Cytoplasm]]
-[[Category: Cytoskeleton]]
-[[Category: Membrane]]