2va1: Difference between revisions

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OCA

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 ==Crystal structure of UMP kinase from Ureaplasma parvum==
-<StructureSection load='2va1' size='340' side='right' caption='[[2va1]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
+<StructureSection load='2va1' size='340' side='right'caption='[[2va1]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[2va1]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_27815 Atcc 27815]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VA1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2VA1 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[2va1]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Ureaplasma_parvum Ureaplasma parvum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VA1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VA1 FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2va1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2va1 OCA], [http://pdbe.org/2va1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2va1 RCSB], [http://www.ebi.ac.uk/pdbsum/2va1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2va1 ProSAT]</span></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2va1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2va1 OCA], [https://pdbe.org/2va1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2va1 RCSB], [https://www.ebi.ac.uk/pdbsum/2va1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2va1 ProSAT]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/PYRH_UREPA PYRH_UREPA] Catalyzes the reversible phosphorylation of UMP to UDP, with ATP as the most efficient phosphate donor. Is also able to phosphorylate dUMP.<ref>PMID:17355283</ref> <ref>PMID:18021254</ref>
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
@@ Line 33: / Line 36: @@
 __TOC__
 </StructureSection>
-[[Category: Atcc 27815]]
+[[Category: Large Structures]]
-[[Category: Egeblad-Welin, L]]
+[[Category: Ureaplasma parvum]]
-[[Category: Eriksson, S]]
+[[Category: Egeblad-Welin L]]
-[[Category: Wang, L]]
+[[Category: Eriksson S]]
-[[Category: Welin, M]]
+[[Category: Wang L]]
-[[Category: Amino acid kinase family]]
+[[Category: Welin M]]
-[[Category: Kinase]]
-[[Category: Pyrimidine biosynthesis]]
-[[Category: Transferase]]
-[[Category: Umpk]]
-[[Category: Uridylate kinase]]