2v8t: Difference between revisions

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-[[Image:2v8t.jpg|left|200px]]
-<!--
+==Crystal structure of Mn catalase from Thermus Thermophilus complexed with chloride==
-The line below this paragraph, containing "STRUCTURE_2v8t", creates the "Structure Box" on the page.
+<StructureSection load='2v8t' size='340' side='right'caption='[[2v8t]], [[Resolution|resolution]] 0.98&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2v8t]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB27 Thermus thermophilus HB27]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V8T OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2V8T FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 0.98&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=LI:LITHIUM+ION'>LI</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-{{STRUCTURE_2v8t|  PDB=2v8t  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2v8t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v8t OCA], [https://pdbe.org/2v8t PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2v8t RCSB], [https://www.ebi.ac.uk/pdbsum/2v8t PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2v8t ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q72GH6_THET2 Q72GH6_THET2]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/v8/2v8t_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2v8t ConSurf].
+<div style="clear:both"></div>
-'''CRYSTAL STRUCTURE OF MN CATALASE FROM THERMUS THERMOPHILUS COMPLEXED WITH CHLORIDE'''
+==See Also==
+*[[Catalase 3D structures|Catalase 3D structures]]
+__TOC__
-==About this Structure==
+</StructureSection>
-V8T is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V8T OCA].
+[[Category: Large Structures]]
-[[Category: Catalase]]
+[[Category: Thermus thermophilus HB27]]
-[[Category: Single protein]]
+[[Category: Antonyuk SV]]
-[[Category: Thermus thermophilus]]
+[[Category: Artymiuk PJ]]
-[[Category: Antonyuk, S V.]]
+[[Category: Barynin VV]]
-[[Category: Artymiuk, P J.]]
+[[Category: Harrison PM]]
-[[Category: Barynin, V V.]]
+[[Category: Lamsin VS]]
-[[Category: Harrison, P M.]]
+[[Category: Melik-Adamyan WR]]
-[[Category: Lamsin, V S.]]
+[[Category: Popov AN]]
-[[Category: Melik-Adamyan, W R.]]
+[[Category: Vaguine AA]]
-[[Category: Popov, A N.]]
-[[Category: Vaguine, A A.]]
-[[Category: Manganese catalase]]
-[[Category: Oxidoreductase]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 18:23:01 2008''