2v8t: Difference between revisions

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-[[Image:2v8t.gif|left|200px]]<br />
-<applet load="2v8t" size="450" color="white" frame="true" align="right" spinBox="true"
-caption="2v8t, resolution 0.98&Aring;" />
-'''CRYSTAL STRUCTURE OF MN CATALASE FROM THERMUS THERMOPHILUS COMPLEXED WITH CHLORIDE'''<br />
-==About this Structure==
+==Crystal structure of Mn catalase from Thermus Thermophilus complexed with chloride==
-V8T is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus] with MN, CL, SO4 and LI as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Catalase Catalase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.6 1.11.1.6] Structure known Active Site: AC1. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2V8T OCA].
+<StructureSection load='2v8t' size='340' side='right'caption='[[2v8t]], [[Resolution|resolution]] 0.98&Aring;' scene=''>
-[[Category: Catalase]]
+== Structural highlights ==
-[[Category: Single protein]]
+<table><tr><td colspan='2'>[[2v8t]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB27 Thermus thermophilus HB27]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V8T OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2V8T FirstGlance]. <br>
-[[Category: Thermus thermophilus]]
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 0.98&#8491;</td></tr>
-[[Category: Antonyuk, S.V.]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=LI:LITHIUM+ION'>LI</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-[[Category: Artymiuk, P.J.]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2v8t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v8t OCA], [https://pdbe.org/2v8t PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2v8t RCSB], [https://www.ebi.ac.uk/pdbsum/2v8t PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2v8t ProSAT]</span></td></tr>
-[[Category: Barynin, V.V.]]
+</table>
-[[Category: Harrison, P.M.]]
+== Function ==
-[[Category: Lamsin, V.S.]]
+[https://www.uniprot.org/uniprot/Q72GH6_THET2 Q72GH6_THET2]
-[[Category: Melik-Adamyan, W.R.]]
+== Evolutionary Conservation ==
-[[Category: Popov, A.N.]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: Vaguine, A.A.]]
+Check<jmol>
-[[Category: CL]]
+  <jmolCheckbox>
-[[Category: LI]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/v8/2v8t_consurf.spt"</scriptWhenChecked>
-[[Category: MN]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: SO4]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: manganese catalase]]
+  </jmolCheckbox>
-[[Category: oxidoreductase]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2v8t ConSurf].
+<div style="clear:both"></div>
-''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Mon Nov  5 18:51:58 2007''
+==See Also==
+*[[Catalase 3D structures|Catalase 3D structures]]
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
+[[Category: Thermus thermophilus HB27]]
+[[Category: Antonyuk SV]]
+[[Category: Artymiuk PJ]]
+[[Category: Barynin VV]]
+[[Category: Harrison PM]]
+[[Category: Lamsin VS]]
+[[Category: Melik-Adamyan WR]]
+[[Category: Popov AN]]
+[[Category: Vaguine AA]]