2jin: Difference between revisions

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-[[Image:2jin.gif|left|200px]]<br />
-<applet load="2jin" size="450" color="white" frame="true" align="right" spinBox="true"
-caption="2jin, resolution 1.50&Aring;" />
-'''CRYSTAL STRUCTURE OF PDZ DOMAIN OF SYNAPTOJANIN-2 BINDING PROTEIN'''<br />
-==About this Structure==
+==Crystal structure of PDZ domain of Synaptojanin-2 binding protein==
-JIN is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] with NA and SO4 as [http://en.wikipedia.org/wiki/ligands ligands]. Structure known Active Site: AC1. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2JIN OCA].
+<StructureSection load='2jin' size='340' side='right'caption='[[2jin]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[2jin]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JIN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JIN FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jin FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jin OCA], [https://pdbe.org/2jin PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jin RCSB], [https://www.ebi.ac.uk/pdbsum/2jin PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jin ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/SYJ2B_HUMAN SYJ2B_HUMAN]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ji/2jin_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2jin ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
 [[Category: Homo sapiens]]
-[[Category: Single protein]]
+[[Category: Large Structures]]
-[[Category: Arrowsmith, C.H.]]
+[[Category: Arrowsmith CH]]
-[[Category: Cooper, C.]]
+[[Category: Cooper C]]
-[[Category: Doyle, D.]]
+[[Category: Doyle D]]
-[[Category: Edwards, A.]]
+[[Category: Edwards A]]
-[[Category: Elkins, J.]]
+[[Category: Elkins J]]
-[[Category: Phillips, C.]]
+[[Category: Phillips C]]
-[[Category: Pike, A.C.W.]]
+[[Category: Pike ACW]]
-[[Category: Salah, E.]]
+[[Category: Salah E]]
-[[Category: Sundstrom, M.]]
+[[Category: Sundstrom M]]
-[[Category: Tickle, J.]]
+[[Category: Tickle J]]
-[[Category: Turnbull, A.P.]]
+[[Category: Turnbull AP]]
-[[Category: Weigelt, J.]]
+[[Category: Weigelt J]]
-[[Category: NA]]
-[[Category: SO4]]
-[[Category: membrane]]
-[[Category: membrane protein]]
-[[Category: mitochondria distribution]]
-[[Category: mitochondrion]]
-[[Category: outer membrane]]
-[[Category: pdz]]
-[[Category: scaffold]]
-[[Category: transmembrane]]
-''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Mon Nov 12 22:56:11 2007''