2cfe: Difference between revisions

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-==THE 1.5 A CRYSTAL STRUCTURE OF THE MALASSEZIA SYMPODIALIS MALA S 6 ALLERGEN, A MEMBER OF THE CYCLOPHILIN PAN-ALLERGEN FAMILY==
-<StructureSection load='2cfe' size='340' side='right' caption='[[2cfe]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
+==The 1.5 A crystal structure of the Malassezia sympodialis Mala s 6 allergen, a member of the cyclophilin pan-allergen family==
+<StructureSection load='2cfe' size='340' side='right'caption='[[2cfe]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[2cfe]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_96803 Atcc 96803]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CFE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CFE FirstGlance]. <br>
+<table><tr><td colspan='2'>[[2cfe]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Malassezia_sympodialis Malassezia sympodialis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CFE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CFE FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ALA:ALANINE'>ALA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PRO:PROLINE'>PRO</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cfe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cfe OCA], [http://pdbe.org/2cfe PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2cfe RCSB], [http://www.ebi.ac.uk/pdbsum/2cfe PDBsum]</span></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ALA:ALANINE'>ALA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PRO:PROLINE'>PRO</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cfe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cfe OCA], [https://pdbe.org/2cfe PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cfe RCSB], [https://www.ebi.ac.uk/pdbsum/2cfe PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cfe ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/O93970_MALSM O93970_MALSM]] PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.[RuleBase:RU004223]
+[https://www.uniprot.org/uniprot/O93970_MALSM O93970_MALSM] PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.[RuleBase:RU004223]
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cf/2cfe_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cf/2cfe_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cfe ConSurf].
 <div style="clear:both"></div>
 <div style="background-color:#fffaf0;">
@@ Line 29: / Line 31: @@
 ==See Also==
-*[[Cyclophilin|Cyclophilin]]
+*[[Cyclophilin 3D structures|Cyclophilin 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Atcc 96803]]
+[[Category: Large Structures]]
-[[Category: Crameri, R]]
+[[Category: Malassezia sympodialis]]
-[[Category: Fluckiger, S]]
+[[Category: Crameri R]]
-[[Category: Glaser, A G]]
+[[Category: Fluckiger S]]
-[[Category: Limacher, A]]
+[[Category: Glaser AG]]
-[[Category: Scapozza, L]]
+[[Category: Limacher A]]
-[[Category: Scheynius, A]]
+[[Category: Scapozza L]]
-[[Category: Allergen]]
+[[Category: Scheynius A]]
-[[Category: Autoreactivity]]
-[[Category: Cyclophilin]]
-[[Category: Epitope]]
-[[Category: Fungi]]
-[[Category: Ige]]
-[[Category: Immune system]]
-[[Category: Malassezia sympodiali]]