2c51: Difference between revisions

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 <StructureSection load='2c51' size='340' side='right'caption='[[2c51]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[2c51]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteriophage_ms2 Bacteriophage ms2]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1h8j 1h8j]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2C51 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2C51 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[2c51]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_phage_MS2 Escherichia phage MS2]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1h8j 1h8j]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2C51 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2C51 FirstGlance]. <br>
-</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1aq3|1aq3]], [[1aq4|1aq4]], [[1bms|1bms]], [[1dzs|1dzs]], [[1gkv|1gkv]], [[1gkw|1gkw]], [[1hdw|1hdw]], [[1kuo|1kuo]], [[1msc|1msc]], [[1mst|1mst]], [[1mva|1mva]], [[1mvb|1mvb]], [[1u1y|1u1y]], [[1zdh|1zdh]], [[1zdi|1zdi]], [[1zdj|1zdj]], [[1zdk|1zdk]], [[2bny|2bny]], [[2bq5|2bq5]], [[2bs0|2bs0]], [[2bs1|2bs1]], [[2bu1|2bu1]], [[2c4z|2c4z]], [[2c4y|2c4y]], [[2c50|2c50]], [[2ms2|2ms2]], [[5msf|5msf]], [[6msf|6msf]], [[7msf|7msf]]</td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2c51 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2c51 OCA], [http://pdbe.org/2c51 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2c51 RCSB], [http://www.ebi.ac.uk/pdbsum/2c51 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2c51 ProSAT]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2c51 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2c51 OCA], [https://pdbe.org/2c51 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2c51 RCSB], [https://www.ebi.ac.uk/pdbsum/2c51 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2c51 ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/COAT_BPMS2 COAT_BPMS2]] Forms the phage shell; binds to the phage RNA.
+[https://www.uniprot.org/uniprot/CAPSD_BPMS2 CAPSD_BPMS2] Self-assembles to form the T=3 icosahedral virus shell that protects the viral nucleic acid. Acts as a translational repressor by binding with high specificity to a single stem-loop structure in the genomic RNA that contains the initiation codon of the gene for the viral replicase. Involved in virus assembly through the interaction between a capsid protein dimer and the multiple packaging signals present in the RNA genome.<ref>PMID:16531233</ref> <ref>PMID:18662904</ref> <ref>PMID:26608810</ref> <ref>PMID:8254664</ref> <ref>PMID:9245600</ref> <ref>PMID:9469847</ref>
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
@@ Line 32: / Line 32: @@
 __TOC__
 </StructureSection>
-[[Category: Bacteriophage ms2]]
+[[Category: Escherichia phage MS2]]
 [[Category: Large Structures]]
-[[Category: Davis, D R]]
+[[Category: Davis DR]]
-[[Category: Fridborg, K]]
+[[Category: Fridborg K]]
-[[Category: Grahn, E]]
+[[Category: Grahn E]]
-[[Category: Helgstrand, C]]
+[[Category: Helgstrand C]]
-[[Category: Lago, H]]
+[[Category: Lago H]]
-[[Category: Liljas, L]]
+[[Category: Liljas L]]
-[[Category: Moss, T]]
+[[Category: Moss T]]
-[[Category: Stockley, P G]]
+[[Category: Stockley PG]]
-[[Category: Stonehouse, N J]]
+[[Category: Stonehouse NJ]]
-[[Category: Sundaram, M]]
+[[Category: Sundaram M]]
-[[Category: Tars, K]]
+[[Category: Tars K]]
-[[Category: Capsid]]
-[[Category: Hairpin]]
-[[Category: Icosahedral virus]]
-[[Category: Levivirus]]
-[[Category: Virus coat protein]]
-[[Category: Virus-rna complex]]
-[[Category: Virus/rna]]
-[[Category: Virus/viral protein/rna]]