2bux: Difference between revisions

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-[[Image:2bux.gif|left|200px]]<br />
-<applet load="2bux" size="450" color="white" frame="true" align="right" spinBox="true"
-caption="2bux, resolution 1.8&Aring;" />
-'''CRYSTAL STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE FROM ACINETOBACTER SP. ADP1 MUTANT R133H'''<br />
-==About this Structure==
+==Crystal Structure of Protocatechuate 3,4-Dioxygenase from Acinetobacter Sp. ADP1 Mutant R133H==
-BUX is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/Acinetobacter_calcoaceticus Acinetobacter calcoaceticus] with FE and HYD as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Protocatechuate_3,4-dioxygenase Protocatechuate 3,4-dioxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.13.11.3 1.13.11.3] Structure known Active Site: AC1. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2BUX OCA].
+<StructureSection load='2bux' size='340' side='right'caption='[[2bux]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-[[Category: Acinetobacter calcoaceticus]]
+== Structural highlights ==
-[[Category: Protein complex]]
+<table><tr><td colspan='2'>[[2bux]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Acinetobacter_baylyi_ADP1 Acinetobacter baylyi ADP1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BUX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BUX FirstGlance]. <br>
-[[Category: Protocatechuate 3,4-dioxygenase]]
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-[[Category: Argenio, D.A.D.]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=OH:HYDROXIDE+ION'>OH</scene></td></tr>
-[[Category: Lipscomb, J.D.]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2bux FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bux OCA], [https://pdbe.org/2bux PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2bux RCSB], [https://www.ebi.ac.uk/pdbsum/2bux PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2bux ProSAT]</span></td></tr>
-[[Category: Ohlendorf, D.H.]]
+</table>
-[[Category: Ornston, L.N.]]
+== Function ==
-[[Category: Valley, M.P.]]
+[https://www.uniprot.org/uniprot/PCXA_ACIAD PCXA_ACIAD] Plays an essential role in the utilization of numerous aromatic and hydroaromatic compounds via the beta-ketoadipate pathway.
-[[Category: Vetting, M.W.]]
+== Evolutionary Conservation ==
-[[Category: FE]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: HYD]]
+Check<jmol>
-[[Category: aromatic degradation]]
+  <jmolCheckbox>
-[[Category: aromatic hydrocarbons catabolism]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bu/2bux_consurf.spt"</scriptWhenChecked>
-[[Category: dioxygenase]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: iron]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: metal-binding]]
+  </jmolCheckbox>
-[[Category: non-heme iron]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2bux ConSurf].
-[[Category: oxidoreductase]]
+<div style="clear:both"></div>
-''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Mon Nov  5 13:12:03 2007''
+==See Also==
+*[[Dioxygenase 3D structures|Dioxygenase 3D structures]]
+__TOC__
+</StructureSection>
+[[Category: Acinetobacter baylyi ADP1]]
+[[Category: Large Structures]]
+[[Category: D'Argenio DA]]
+[[Category: Lipscomb JD]]
+[[Category: Ohlendorf DH]]
+[[Category: Ornston LN]]
+[[Category: Valley MP]]
+[[Category: Vetting MW]]