2bo1: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
==CRYSTAL STRUCTURE OF A HYBRID RIBOSOMAL PROTEIN L30E WITH SURFACE RESIDUES FROM T. CELER, AND CORE RESIDUES FROM YEAST==
 
<StructureSection load='2bo1' size='340' side='right' caption='[[2bo1]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
==Crystal structure of a hybrid ribosomal protein L30e with surface residues from T. celer, and core residues from yeast==
<StructureSection load='2bo1' size='340' side='right'caption='[[2bo1]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2bo1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_35543 Atcc 35543]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BO1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BO1 FirstGlance]. <br>
<table><tr><td colspan='2'>[[2bo1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermococcus_celer Thermococcus celer]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BO1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BO1 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1go0|1go0]], [[1go1|1go1]], [[1h7m|1h7m]], [[1w3e|1w3e]], [[1w40|1w40]], [[1w41|1w41]], [[1w42|1w42]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bo1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bo1 OCA], [http://pdbe.org/2bo1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2bo1 RCSB], [http://www.ebi.ac.uk/pdbsum/2bo1 PDBsum]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2bo1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bo1 OCA], [https://pdbe.org/2bo1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2bo1 RCSB], [https://www.ebi.ac.uk/pdbsum/2bo1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2bo1 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/RL30E_THECE RL30E_THECE]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bo/2bo1_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bo/2bo1_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2bo1 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Atcc 35543]]
[[Category: Large Structures]]
[[Category: Cha, S S]]
[[Category: Thermococcus celer]]
[[Category: Lee, C F]]
[[Category: Cha SS]]
[[Category: Lee, H S]]
[[Category: Lee CF]]
[[Category: Wong, K B]]
[[Category: Lee HS]]
[[Category: Ribonucleoprotein]]
[[Category: Wong KB]]
[[Category: Ribosomal protein]]

Latest revision as of 16:48, 13 December 2023

Crystal structure of a hybrid ribosomal protein L30e with surface residues from T. celer, and core residues from yeastCrystal structure of a hybrid ribosomal protein L30e with surface residues from T. celer, and core residues from yeast

Structural highlights

2bo1 is a 1 chain structure with sequence from Thermococcus celer. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.7Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

RL30E_THECE

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2bo1, resolution 1.70Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA