2bgl: Difference between revisions
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==X- | |||
<StructureSection load='2bgl' size='340' side='right' caption='[[2bgl]], [[Resolution|resolution]] 2.80Å' scene=''> | ==X-Ray structure of binary-Secoisolariciresinol Dehydrogenase== | ||
<StructureSection load='2bgl' size='340' side='right'caption='[[2bgl]], [[Resolution|resolution]] 2.80Å' scene=''> | |||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2bgl]] is a 1 chain structure with sequence from [ | <table><tr><td colspan='2'>[[2bgl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Podophyllum_peltatum Podophyllum peltatum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BGL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BGL FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8Å</td></tr> | ||
<tr id=' | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAJ:NICOTINAMIDE-ADENINE-DINUCLEOTIDE+(ACIDIC+FORM)'>NAJ</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2bgl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bgl OCA], [https://pdbe.org/2bgl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2bgl RCSB], [https://www.ebi.ac.uk/pdbsum/2bgl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2bgl ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
[ | [https://www.uniprot.org/uniprot/SILD_PODPE SILD_PODPE] Oxidoreductase involved in lignan biosynthesis. Catalyzes the stereospecific conversion of (-)-secoisolariciresinol to (-)-matairesinol via a lactol intermediate.<ref>PMID:11278426</ref> <ref>PMID:16493463</ref> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bg/2bgl_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bg/2bgl_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: Davin | [[Category: Podophyllum peltatum]] | ||
[[Category: Kang | [[Category: Davin LB]] | ||
[[Category: Lewis | [[Category: Kang C]] | ||
[[Category: Moinuddin | [[Category: Lewis NG]] | ||
[[Category: Youn | [[Category: Moinuddin SG]] | ||
[[Category: Youn B]] | |||