1uyu: Difference between revisions

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OCA

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 ==Xenon COMPLEX OF wildtype P450CAM FROM PSEUDOMONAS PUTIDA==
-<StructureSection load='1uyu' size='340' side='right' caption='[[1uyu]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
+<StructureSection load='1uyu' size='340' side='right'caption='[[1uyu]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1uyu]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_fluorescens_putidus"_flugge_1886 "bacillus fluorescens putidus" flugge 1886]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UYU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UYU FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1uyu]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UYU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UYU FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CAM:CAMPHOR'>CAM</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=XE:XENON'>XE</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1akd|1akd]], [[1c8j|1c8j]], [[1cp4|1cp4]], [[1dz4|1dz4]], [[1dz6|1dz6]], [[1dz8|1dz8]], [[1dz9|1dz9]], [[1geb|1geb]], [[1gek|1gek]], [[1gem|1gem]], [[1gjm|1gjm]], [[1iwi|1iwi]], [[1iwj|1iwj]], [[1iwk|1iwk]], [[1j51|1j51]], [[1k2o|1k2o]], [[1lwl|1lwl]], [[1mpw|1mpw]], [[1noo|1noo]], [[1o76|1o76]], [[1p2y|1p2y]], [[1p7r|1p7r]], [[1pha|1pha]], [[1phb|1phb]], [[1phc|1phc]], [[1phd|1phd]], [[1phe|1phe]], [[1phf|1phf]], [[1phg|1phg]], [[1qmq|1qmq]], [[2cp4|2cp4]], [[2cpp|2cpp]], [[3cp4|3cp4]], [[3cpp|3cpp]], [[4cp4|4cp4]], [[4cpp|4cpp]], [[5cp4|5cp4]], [[5cpp|5cpp]], [[6cp4|6cp4]], [[6cpp|6cpp]], [[7cpp|7cpp]], [[8cpp|8cpp]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CAM:CAMPHOR'>CAM</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=XE:XENON'>XE</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1uyu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1uyu OCA], [http://pdbe.org/1uyu PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1uyu RCSB], [http://www.ebi.ac.uk/pdbsum/1uyu PDBsum]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1uyu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1uyu OCA], [https://pdbe.org/1uyu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1uyu RCSB], [https://www.ebi.ac.uk/pdbsum/1uyu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1uyu ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/CPXA_PSEPU CPXA_PSEPU]] Involved in a camphor oxidation system.
+[https://www.uniprot.org/uniprot/CPXA_PSEPU CPXA_PSEPU] Involved in a camphor oxidation system.
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/uy/1uyu_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/uy/1uyu_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1uyu ConSurf].
 <div style="clear:both"></div>
 <div style="background-color:#fffaf0;">
@@ Line 30: / Line 31: @@
 ==See Also==
-*[[Cytochrome P450|Cytochrome P450]]
+*[[Cytochrome P450 3D structures|Cytochrome P450 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Bacillus fluorescens putidus flugge 1886]]
+[[Category: Large Structures]]
-[[Category: Schlichting, I]]
+[[Category: Pseudomonas putida]]
-[[Category: Sudarko, X]]
+[[Category: Schlichting I]]
-[[Category: Wade, R C]]
+[[Category: Sudarko X]]
-[[Category: Winn, P J]]
+[[Category: Wade RC]]
-[[Category: Electron transport]]
+[[Category: Winn PJ]]
-[[Category: Heme]]
-[[Category: Mono-oxygenase]]
-[[Category: Oxidoreductase]]