1uvl: Difference between revisions

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 ==The structural basis for RNA specificity and Ca2 inhibition of an RNA-dependent RNA polymerase phi6p2 with 5nt RNA. Conformation B==
-<StructureSection load='1uvl' size='340' side='right' caption='[[1uvl]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
+<StructureSection load='1uvl' size='340' side='right'caption='[[1uvl]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1uvl]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Bpph6 Bpph6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UVL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UVL FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1uvl]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_virus_phi6 Pseudomonas virus phi6] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UVL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UVL FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1hhs|1hhs]], [[1hht|1hht]], [[1hi0|1hi0]], [[1hi1|1hi1]], [[1hi8|1hi8]], [[1uvi|1uvi]], [[1uvm|1uvm]], [[1uvk|1uvk]], [[1uvj|1uvj]], [[1uvn|1uvn]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">P2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10879 BPPH6])</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1uvl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1uvl OCA], [https://pdbe.org/1uvl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1uvl RCSB], [https://www.ebi.ac.uk/pdbsum/1uvl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1uvl ProSAT]</span></td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/RNA-directed_RNA_polymerase RNA-directed RNA polymerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.48 2.7.7.48] </span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1uvl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1uvl OCA], [http://pdbe.org/1uvl PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1uvl RCSB], [http://www.ebi.ac.uk/pdbsum/1uvl PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1uvl ProSAT]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/RDRP_BPPH6 RDRP_BPPH6]
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 21: / Line 21: @@
 ==See Also==
-*[[RNA polymerase|RNA polymerase]]
+*[[RNA polymerase 3D structures|RNA polymerase 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Bpph6]]
+[[Category: Large Structures]]
-[[Category: RNA-directed RNA polymerase]]
+[[Category: Pseudomonas virus phi6]]
-[[Category: Bamford, D]]
+[[Category: Synthetic construct]]
-[[Category: Butcher, S]]
+[[Category: Bamford D]]
-[[Category: Grimes, J M]]
+[[Category: Butcher S]]
-[[Category: Makeyev, E V]]
+[[Category: Grimes JM]]
-[[Category: Salgado, P S]]
+[[Category: Makeyev EV]]
-[[Category: Stuart, D I]]
+[[Category: Salgado PS]]
-[[Category: Oligonucleotide polymerase]]
+[[Category: Stuart DI]]
-[[Category: Polymerase]]
-[[Category: Structural protein]]
-[[Category: Transcription]]
-[[Category: Transferase]]