1gw2: Difference between revisions
Jump to navigation
Jump to search
New page: left|200px<br /> <applet load="1gw2" size="450" color="white" frame="true" align="right" spinBox="true" caption="1gw2, resolution 2.15Å" /> '''RECOMBINANT HORSERA... |
No edit summary |
||
| (24 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
== | ==RECOMBINANT HORSERADISH PEROXIDASE C1A THR171SER IN COMPLEX WITH FERULIC ACID== | ||
<StructureSection load='1gw2' size='340' side='right'caption='[[1gw2]], [[Resolution|resolution]] 2.15Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[1gw2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Armoracia_rusticana Armoracia rusticana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GW2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1GW2 FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.15Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FER:3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC+ACID'>FER</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1gw2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gw2 OCA], [https://pdbe.org/1gw2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1gw2 RCSB], [https://www.ebi.ac.uk/pdbsum/1gw2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1gw2 ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/PER1A_ARMRU PER1A_ARMRU] Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue. | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gw/1gw2_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1gw2 ConSurf]. | |||
<div style="clear:both"></div> | |||
==See Also== | |||
*[[Horseradish peroxidase|Horseradish peroxidase]] | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Armoracia rusticana]] | [[Category: Armoracia rusticana]] | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: Brissett | [[Category: Brissett N]] | ||
[[Category: Gajhede | [[Category: Gajhede M]] | ||
[[Category: Henriksen | [[Category: Henriksen A]] | ||
[[Category: Meno | [[Category: Meno K]] | ||
