1gun: Difference between revisions

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OCA

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 ==MopII from Clostridium pasteurianum complexed with molybdate (partial)==
-<StructureSection load='1gun' size='340' side='right' caption='[[1gun]], [[Resolution|resolution]] 1.83&Aring;' scene=''>
+<StructureSection load='1gun' size='340' side='right'caption='[[1gun]], [[Resolution|resolution]] 1.83&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1gun]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_pasteurianus"_(winogradsky_1895)_lehmann_and_neumann_1907 "bacillus pasteurianus" (winogradsky 1895) lehmann and neumann 1907]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GUN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1GUN FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1gun]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_pasteurianum Clostridium pasteurianum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GUN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1GUN FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MOO:MOLYBDATE+ION'>MOO</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.83&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1gug|1gug]], [[1guo|1guo]], [[1gus|1gus]], [[1gut|1gut]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MOO:MOLYBDATE+ION'>MOO</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gun FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gun OCA], [http://pdbe.org/1gun PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1gun RCSB], [http://www.ebi.ac.uk/pdbsum/1gun PDBsum]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1gun FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gun OCA], [https://pdbe.org/1gun PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1gun RCSB], [https://www.ebi.ac.uk/pdbsum/1gun PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1gun ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/MOP2_CLOPA MOP2_CLOPA]] Binds one mole of molybdenum per mole of protein and contains a pterin.
+[https://www.uniprot.org/uniprot/MOP2_CLOPA MOP2_CLOPA] Binds one mole of molybdenum per mole of protein and contains a pterin.
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gu/1gun_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gu/1gun_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1gun ConSurf].
 <div style="clear:both"></div>
 <div style="background-color:#fffaf0;">
@@ Line 32: / Line 33: @@
 __TOC__
 </StructureSection>
-[[Category: Harrison, J A]]
+[[Category: Clostridium pasteurianum]]
-[[Category: Hunter, W N]]
+[[Category: Large Structures]]
-[[Category: Schuettelkopf, A W]]
+[[Category: Harrison JA]]
-[[Category: Molbindin]]
+[[Category: Hunter WN]]
-[[Category: Molybdate binding]]
+[[Category: Schuettelkopf AW]]
-[[Category: Mop]]
-[[Category: Transport protein]]