5o1o: Difference between revisions

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==Crystal structure of human aminoadipate semialdehyde synthase, saccharopine dehydrogenase domain with proline bound.==
==Crystal structure of human aminoadipate semialdehyde synthase, saccharopine dehydrogenase domain with proline bound.==
<StructureSection load='5o1o' size='340' side='right' caption='[[5o1o]], [[Resolution|resolution]] 2.48&Aring;' scene=''>
<StructureSection load='5o1o' size='340' side='right'caption='[[5o1o]], [[Resolution|resolution]] 2.48&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5o1o]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5O1O OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5O1O FirstGlance]. <br>
<table><tr><td colspan='2'>[[5o1o]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5O1O OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5O1O FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=PRO:PROLINE'>PRO</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.48&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AASS ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=PRO:PROLINE'>PRO</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5o1o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5o1o OCA], [http://pdbe.org/5o1o PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5o1o RCSB], [http://www.ebi.ac.uk/pdbsum/5o1o PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5o1o ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5o1o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5o1o OCA], [https://pdbe.org/5o1o PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5o1o RCSB], [https://www.ebi.ac.uk/pdbsum/5o1o PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5o1o ProSAT]</span></td></tr>
</table>
</table>
== Disease ==
== Disease ==
[[http://www.uniprot.org/uniprot/AASS_HUMAN AASS_HUMAN]] Hyperlysinemia;Saccharopinuria. The disease is caused by mutations affecting the gene represented in this entry.  The protein represented in this entry is involved in disease pathogenesis. A selective decrease in mitochondrial NADP(H) levels due to NADK2 mutations causes a deficiency of NADPH-dependent mitochondrial enzymes, such as DECR1 and AASS.<ref>PMID:24847004</ref>
[https://www.uniprot.org/uniprot/AASS_HUMAN AASS_HUMAN] Hyperlysinemia;Saccharopinuria. The disease is caused by mutations affecting the gene represented in this entry.  The protein represented in this entry is involved in disease pathogenesis. A selective decrease in mitochondrial NADP(H) levels due to NADK2 mutations causes a deficiency of NADPH-dependent mitochondrial enzymes, such as DECR1 and AASS.<ref>PMID:24847004</ref>  
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/AASS_HUMAN AASS_HUMAN]] Bifunctional enzyme that catalyzes the first two steps in lysine degradation. The N-terminal and the C-terminal contain lysine-ketoglutarate reductase and saccharopine dehydrogenase activity, respectively.  
[https://www.uniprot.org/uniprot/AASS_HUMAN AASS_HUMAN] Bifunctional enzyme that catalyzes the first two steps in lysine degradation. The N-terminal and the C-terminal contain lysine-ketoglutarate reductase and saccharopine dehydrogenase activity, respectively.
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Human]]
[[Category: Homo sapiens]]
[[Category: Arrowsmith, C]]
[[Category: Large Structures]]
[[Category: Arruda, P]]
[[Category: Arrowsmith C]]
[[Category: Bountra, C]]
[[Category: Arruda P]]
[[Category: Burgess-Brown, N]]
[[Category: Bountra C]]
[[Category: Collins, P]]
[[Category: Burgess-Brown N]]
[[Category: Delft, F von]]
[[Category: Collins P]]
[[Category: Edwards, A]]
[[Category: Edwards A]]
[[Category: Goubin, S]]
[[Category: Goubin S]]
[[Category: Kopec, J]]
[[Category: Kopec J]]
[[Category: Krojer, T]]
[[Category: Krojer T]]
[[Category: Kupinska, K]]
[[Category: Kupinska K]]
[[Category: Mathea, S]]
[[Category: Mathea S]]
[[Category: Pena, I A]]
[[Category: Pena IA]]
[[Category: Rembeza, E]]
[[Category: Rembeza E]]
[[Category: Strain-Damerell, C]]
[[Category: Strain-Damerell C]]
[[Category: Talon, R]]
[[Category: Talon R]]
[[Category: Velupillai, S]]
[[Category: Velupillai S]]
[[Category: Yue, W W]]
[[Category: Yue WW]]
[[Category: Human aminoadipate semialdehyde synthase]]
[[Category: Von Delft F]]
[[Category: Oxidoreductase]]
[[Category: Sdr]]

Latest revision as of 22:03, 29 November 2023

Crystal structure of human aminoadipate semialdehyde synthase, saccharopine dehydrogenase domain with proline bound.Crystal structure of human aminoadipate semialdehyde synthase, saccharopine dehydrogenase domain with proline bound.

Structural highlights

5o1o is a 2 chain structure with sequence from Homo sapiens. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.48Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Disease

AASS_HUMAN Hyperlysinemia;Saccharopinuria. The disease is caused by mutations affecting the gene represented in this entry. The protein represented in this entry is involved in disease pathogenesis. A selective decrease in mitochondrial NADP(H) levels due to NADK2 mutations causes a deficiency of NADPH-dependent mitochondrial enzymes, such as DECR1 and AASS.[1]

Function

AASS_HUMAN Bifunctional enzyme that catalyzes the first two steps in lysine degradation. The N-terminal and the C-terminal contain lysine-ketoglutarate reductase and saccharopine dehydrogenase activity, respectively.

References

  1. Houten SM, Denis S, Te Brinke H, Jongejan A, van Kampen AH, Bradley EJ, Baas F, Hennekam RC, Millington DS, Young SP, Frazier DM, Gucsavas-Calikoglu M, Wanders RJ. Mitochondrial NADP(H) deficiency due to a mutation in NADK2 causes dienoyl-CoA reductase deficiency with hyperlysinemia. Hum Mol Genet. 2014 Sep 15;23(18):5009-16. doi: 10.1093/hmg/ddu218. Epub 2014 May, 8. PMID:24847004 doi:http://dx.doi.org/10.1093/hmg/ddu218

5o1o, resolution 2.48Å

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