1mrt: Difference between revisions

New page: left|200px<br /><applet load="1mrt" size="450" color="white" frame="true" align="right" spinBox="true" caption="1mrt" /> '''CONFORMATION OF CD-7 METALLOTHIONEIN-2 FROM ...
 
No edit summary
 
(14 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:1mrt.gif|left|200px]]<br /><applet load="1mrt" size="450" color="white" frame="true" align="right" spinBox="true"
caption="1mrt" />
'''CONFORMATION OF CD-7 METALLOTHIONEIN-2 FROM RAT LIVER IN AQUEOUS SOLUTION DETERMINED BY NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY'''<br />


==Overview==
==CONFORMATION OF CD-7 METALLOTHIONEIN-2 FROM RAT LIVER IN AQUEOUS SOLUTION DETERMINED BY NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY==
The three-dimensional structure of [Cd7]-metallothionein-2 from rat liver, was determined in aqueous solution, using nuclear magnetic resonance, spectrometry and distance geometry calculations. The experimental data, provided proton-proton distance constraints from measurements of nuclear, Overhauser effects, constraints on the geometry of the metal-cysteine, clusters determined by heteronuclear correlation spectroscopy, and, dihedral angle constraints derived from both coupling constants and, nuclear Overhauser effects. The structure calculations were performed with, the program DISMAN. As in previous studies with rabbit liver, metallothionein-2a, the structure calculations were performed separately, for the alpha and beta-domains containing the 4 and 3-metal clusters, respectively, since no interdomain constraints were found. For both, domains, the global polypeptide fold, the location of polypeptide, secondary structure elements, the architecture of the metal-sulfur cluster, and the local chirality of the metal co-ordination are very similar to the, solution structure of rabbit metallothionein-2a, but show considerable, difference relative to the crystal structure of rat metallothionein-2.
<StructureSection load='1mrt' size='340' side='right'caption='[[1mrt]]' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[1mrt]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_rattus Rattus rattus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MRT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1MRT FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1mrt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1mrt OCA], [https://pdbe.org/1mrt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1mrt RCSB], [https://www.ebi.ac.uk/pdbsum/1mrt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1mrt ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/MT2_RAT MT2_RAT] Metallothioneins have a high content of cysteine residues that bind various heavy metals; these proteins are transcriptionally regulated by both heavy metals and glucocorticoids.
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
The three-dimensional structure of [Cd7]-metallothionein-2 from rat liver was determined in aqueous solution, using nuclear magnetic resonance spectrometry and distance geometry calculations. The experimental data provided proton-proton distance constraints from measurements of nuclear Overhauser effects, constraints on the geometry of the metal-cysteine clusters determined by heteronuclear correlation spectroscopy, and dihedral angle constraints derived from both coupling constants and nuclear Overhauser effects. The structure calculations were performed with the program DISMAN. As in previous studies with rabbit liver metallothionein-2a, the structure calculations were performed separately for the alpha and beta-domains containing the 4 and 3-metal clusters, respectively, since no interdomain constraints were found. For both domains, the global polypeptide fold, the location of polypeptide secondary structure elements, the architecture of the metal-sulfur cluster and the local chirality of the metal co-ordination are very similar to the solution structure of rabbit metallothionein-2a, but show considerable difference relative to the crystal structure of rat metallothionein-2.


==About this Structure==
Conformation of [Cd7]-metallothionein-2 from rat liver in aqueous solution determined by nuclear magnetic resonance spectroscopy.,Schultze P, Worgotter E, Braun W, Wagner G, Vasak M, Kagi JH, Wuthrich K J Mol Biol. 1988 Sep 5;203(1):251-68. PMID:3184190<ref>PMID:3184190</ref>
1MRT is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Rattus_rattus Rattus rattus] with CD as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1MRT OCA].


==Reference==
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
Conformation of [Cd7]-metallothionein-2 from rat liver in aqueous solution determined by nuclear magnetic resonance spectroscopy., Schultze P, Worgotter E, Braun W, Wagner G, Vasak M, Kagi JH, Wuthrich K, J Mol Biol. 1988 Sep 5;203(1):251-68. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=3184190 3184190]
</div>
<div class="pdbe-citations 1mrt" style="background-color:#fffaf0;"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Rattus rattus]]
[[Category: Rattus rattus]]
[[Category: Single protein]]
[[Category: Braun W]]
[[Category: Braun, W.]]
[[Category: Kaegi JHR]]
[[Category: Kaegi, J.H.R.]]
[[Category: Schultze P]]
[[Category: Schultze, P.]]
[[Category: Vasak M]]
[[Category: Vasak, M.]]
[[Category: Wagner G]]
[[Category: Wagner, G.]]
[[Category: Woergoetter E]]
[[Category: Woergoetter, E.]]
[[Category: Wuthrich K]]
[[Category: Wuthrich, K.]]
[[Category: CD]]
[[Category: metallothionein]]
 
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Tue Nov 20 21:39:39 2007''

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA