7d7o: Difference between revisions

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-'''Unreleased structure'''
-The entry 7d7o is ON HOLD
+==Crystal structure of cystathionine gamma-lyase from Bacillus cereus ATCC 14579==
+<StructureSection load='7d7o' size='340' side='right'caption='[[7d7o]], [[Resolution|resolution]] 1.98&Aring;' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[7d7o]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_cereus_ATCC_14579 Bacillus cereus ATCC 14579]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7D7O OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7D7O FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.98&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7d7o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7d7o OCA], [https://pdbe.org/7d7o PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7d7o RCSB], [https://www.ebi.ac.uk/pdbsum/7d7o PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7d7o ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q818A3_BACCR Q818A3_BACCR]
+<div style="background-color:#fffaf0;">
+== Publication Abstract from PubMed ==
+Cysteine is a semiessential amino acid and plays an important role in metabolism and protein structure and has also been applied in various industrial fields, such as pharmaceutical, food, cosmetic, and animal feed industries. Metabolic engineering studies have been conducted for the cysteine production through bacterial fermentation, but studies on the cysteine biosynthetic pathway in microorganisms are limited. We report the biochemical characteristics of cystathionine gamma-lyase from Bacillus cereus ATCC 14579 (BcCGL). We also determined the crystal structure of BcCGL in complex with the PLP cofactor and identified the substrate binding mode. We observed that the replacement of the conserved Glu321 residue to alanine showed increased activity by providing wider active site entrance and hydrophobic interaction for the substrate. We suggest that the structural differences of the alpha13-alpha14 region in CGL enzymes might determine the active site conformation.
-Authors: Sagong, H.-Y., Kim, B., Kim, K.-J.
+Structural and Functional Characterization of Cystathionine gamma-lyase from Bacillus cereus ATCC 14579.,Sagong HY, Kim B, Joo S, Kim KJ J Agric Food Chem. 2020 Dec 23;68(51):15267-15274. doi: 10.1021/acs.jafc.0c06503., Epub 2020 Dec 10. PMID:33301683<ref>PMID:33301683</ref>
-Description: Crystal structure of cystathionine gamma-lyase from Bacillus cereus ATCC 14579
+From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-[[Category: Unreleased Structures]]
+</div>
-[[Category: Kim, K.-J]]
+<div class="pdbe-citations 7d7o" style="background-color:#fffaf0;"></div>
-[[Category: Kim, B]]
-[[Category: Sagong, H.-Y]]
+==See Also==
+*[[Cystathionine beta-lyase|Cystathionine beta-lyase]]
+== References ==
+<references/>
+__TOC__
+</StructureSection>
+[[Category: Bacillus cereus ATCC 14579]]
+[[Category: Large Structures]]
+[[Category: Kim B]]
+[[Category: Kim K-J]]
+[[Category: Sagong H-Y]]