5ygm: Difference between revisions

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 ==Monomeric structure of concanavalin A at pH 7.5 from Carnivalia ensiformis==
-<StructureSection load='5ygm' size='340' side='right' caption='[[5ygm]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
+<StructureSection load='5ygm' size='340' side='right'caption='[[5ygm]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[5ygm]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Brazilian_jack_bean Brazilian jack bean]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5YGM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5YGM FirstGlance]. <br>
+<table><tr><td colspan='2'>[[5ygm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Canavalia_ensiformis Canavalia ensiformis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5YGM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5YGM FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ygm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ygm OCA], [http://pdbe.org/5ygm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ygm RCSB], [http://www.ebi.ac.uk/pdbsum/5ygm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ygm ProSAT]</span></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ygm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ygm OCA], [https://pdbe.org/5ygm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ygm RCSB], [https://www.ebi.ac.uk/pdbsum/5ygm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ygm ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/CONA_CANBR CONA_CANBR]] Glucose/D-mannose specific lectin. Has anti-inflammatory activity in rats. Induces histamine release in mast cells from hamster and rat. Induces lymphocyte proliferation and IFNG production. Shows toxicity against the aquatic snail B.glabrata at concentrations higher than 20 ug/ml.<ref>PMID:1398779</ref> <ref>PMID:7524287</ref> <ref>PMID:8891754</ref> <ref>PMID:18472821</ref> <ref>PMID:9575151</ref> <ref>PMID:10747944</ref> <ref>PMID:19765980</ref>
+[https://www.uniprot.org/uniprot/CONA_CANBR CONA_CANBR] Glucose/D-mannose specific lectin. Has anti-inflammatory activity in rats. Induces histamine release in mast cells from hamster and rat. Induces lymphocyte proliferation and IFNG production. Shows toxicity against the aquatic snail B.glabrata at concentrations higher than 20 ug/ml.<ref>PMID:1398779</ref> <ref>PMID:7524287</ref> <ref>PMID:8891754</ref> <ref>PMID:18472821</ref> <ref>PMID:9575151</ref> <ref>PMID:10747944</ref> <ref>PMID:19765980</ref>
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 20: / Line 21: @@
 ==See Also==
-*[[Concanavalin A|Concanavalin A]]
+*[[Concanavalin 3D structures|Concanavalin 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Brazilian jack bean]]
+[[Category: Canavalia ensiformis]]
-[[Category: Lee, S J]]
+[[Category: Large Structures]]
-[[Category: Park, J H]]
+[[Category: Lee SJ]]
-[[Category: Park, Y R]]
+[[Category: Park JH]]
-[[Category: Concanavalin some]]
+[[Category: Park YR]]
-[[Category: Sugar binding protein]]