3unv: Difference between revisions

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[[Image:3unv.jpg|left|200px]]


<!--
==Pantoea agglomerans Phenylalanine Aminomutase==
The line below this paragraph, containing "STRUCTURE_3unv", creates the "Structure Box" on the page.
<StructureSection load='3unv' size='340' side='right'caption='[[3unv]], [[Resolution|resolution]] 1.54&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3unv]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pantoea_agglomerans Pantoea agglomerans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3UNV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3UNV FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.54&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=KWS:{2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-METHYLIDENE-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>KWS</scene>, <scene name='pdbligand=PHE:PHENYLALANINE'>PHE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=SFE:(3S)-3-AMINO-3-PHENYLPROPANOIC+ACID'>SFE</scene></td></tr>
{{STRUCTURE_3unv|  PDB=3unv  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3unv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3unv OCA], [https://pdbe.org/3unv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3unv RCSB], [https://www.ebi.ac.uk/pdbsum/3unv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3unv ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q84FL5_ENTAG Q84FL5_ENTAG]
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
The structure of the title aminomutase was solved. The steric bulk of Phe 455 (green CPK structure) twists the phenylpropanoate ligand (green stick) by approximately 15 degrees about the C(beta) axis, which precludes a stronger bidentate salt bridge with Arg 323 (magenta structure). Instead, a weaker monodentate bridge may partially explain the different configuration of the product, relative to that obtained with an isoenzyme that forms a bidentate intermediate.


===Pantoea agglomerans Phenylalanine Aminomutase===
Insights into the Mechanistic Pathway of the Pantoea agglomerans Phenylalanine Aminomutase.,Strom S, Wanninayake U, Ratnayake ND, Walker KD, Geiger JH Angew Chem Int Ed Engl. 2012 Feb 8. doi: 10.1002/anie.201108525. PMID:22319000<ref>PMID:22319000</ref>


From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
<div class="pdbe-citations 3unv" style="background-color:#fffaf0;"></div>


==About this Structure==
==See Also==
[[3unv]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pantoea_agglomerans Pantoea agglomerans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3UNV OCA].
*[[Aminomutase 3D structures|Aminomutase 3D structures]]
 
== References ==
==Reference==
<references/>
<ref group="xtra">PMID:022319000</ref><references group="xtra"/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Pantoea agglomerans]]
[[Category: Pantoea agglomerans]]
[[Category: Geiger, J.]]
[[Category: Geiger J]]
[[Category: Strom, S.]]
[[Category: Strom S]]
[[Category: Lyase]]
[[Category: Mio]]

Latest revision as of 12:07, 15 November 2023

Pantoea agglomerans Phenylalanine AminomutasePantoea agglomerans Phenylalanine Aminomutase

Structural highlights

3unv is a 2 chain structure with sequence from Pantoea agglomerans. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.54Å
Ligands:, , , , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q84FL5_ENTAG

Publication Abstract from PubMed

The structure of the title aminomutase was solved. The steric bulk of Phe 455 (green CPK structure) twists the phenylpropanoate ligand (green stick) by approximately 15 degrees about the C(beta) axis, which precludes a stronger bidentate salt bridge with Arg 323 (magenta structure). Instead, a weaker monodentate bridge may partially explain the different configuration of the product, relative to that obtained with an isoenzyme that forms a bidentate intermediate.

Insights into the Mechanistic Pathway of the Pantoea agglomerans Phenylalanine Aminomutase.,Strom S, Wanninayake U, Ratnayake ND, Walker KD, Geiger JH Angew Chem Int Ed Engl. 2012 Feb 8. doi: 10.1002/anie.201108525. PMID:22319000[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

See Also

References

  1. ↑ Strom S, Wanninayake U, Ratnayake ND, Walker KD, Geiger JH. Insights into the Mechanistic Pathway of the Pantoea agglomerans Phenylalanine Aminomutase. Angew Chem Int Ed Engl. 2012 Feb 8. doi: 10.1002/anie.201108525. PMID:22319000 doi:http://dx.doi.org/10.1002/anie.201108525

3unv, resolution 1.54Å

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