3ssv: Difference between revisions

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 ==Engineered low-affinity halide-binding protein derived from YFP: fluoride complex==
-<StructureSection load='3ssv' size='340' side='right' caption='[[3ssv]], [[Resolution|resolution]] 1.86&Aring;' scene=''>
+<StructureSection load='3ssv' size='340' side='right'caption='[[3ssv]], [[Resolution|resolution]] 1.86&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[3ssv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Aequorea_victoria Aequorea victoria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SSV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3SSV FirstGlance]. <br>
+<table><tr><td colspan='2'>[[3ssv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aequorea_victoria Aequorea victoria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SSV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3SSV FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=F:FLUORIDE+ION'>F</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.861&#8491;</td></tr>
-<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CR2:{(4Z)-2-(AMINOMETHYL)-4-[(4-HYDROXYPHENYL)METHYLIDENE]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>CR2</scene></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CR2:{(4Z)-2-(AMINOMETHYL)-4-[(4-HYDROXYPHENYL)METHYLIDENE]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>CR2</scene>, <scene name='pdbligand=F:FLUORIDE+ION'>F</scene></td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3sry|3sry]], [[3ss0|3ss0]], [[3ssh|3ssh]], [[3ssk|3ssk]], [[3ssl|3ssl]], [[3ssp|3ssp]], [[3sst|3sst]], [[3ssy|3ssy]], [[3sve|3sve]], [[3st0|3st0]], [[3sv5|3sv5]], [[3svb|3svb]], [[3svc|3svc]], [[3svd|3svd]]</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ssv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ssv OCA], [https://pdbe.org/3ssv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ssv RCSB], [https://www.ebi.ac.uk/pdbsum/3ssv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ssv ProSAT]</span></td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GFP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6100 Aequorea victoria])</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ssv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ssv OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ssv RCSB], [http://www.ebi.ac.uk/pdbsum/3ssv PDBsum]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/GFP_AEQVI GFP_AEQVI]] Energy-transfer acceptor. Its role is to transduce the blue chemiluminescence of the protein aequorin into green fluorescent light by energy transfer. Fluoresces in vivo upon receiving energy from the Ca(2+)-activated photoprotein aequorin.
+[https://www.uniprot.org/uniprot/GFP_AEQVI GFP_AEQVI] Energy-transfer acceptor. Its role is to transduce the blue chemiluminescence of the protein aequorin into green fluorescent light by energy transfer. Fluoresces in vivo upon receiving energy from the Ca(2+)-activated photoprotein aequorin.
 ==See Also==
-*[[Green Fluorescent Protein|Green Fluorescent Protein]]
+*[[Green Fluorescent Protein 3D structures|Green Fluorescent Protein 3D structures]]
 __TOC__
 </StructureSection>
 [[Category: Aequorea victoria]]
-[[Category: Beese, L S]]
+[[Category: Large Structures]]
-[[Category: Grimley, J S]]
+[[Category: Beese LS]]
-[[Category: Hellinga, H W]]
+[[Category: Grimley JS]]
-[[Category: Wang, W]]
+[[Category: Hellinga HW]]
-[[Category: Beta barrel]]
+[[Category: Wang W]]
-[[Category: Halide binding protein]]
-[[Category: Imaging reagent]]
-[[Category: Luminescent protein]]
-[[Category: Yellow fluorescent protein]]