5mp0: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-'''Unreleased structure'''
-The entry 5mp0 is ON HOLD
+==Human m7GpppN-mRNA Hydrolase (DCP2, NUDT20) Catalytic Domain==
+<StructureSection load='5mp0' size='340' side='right'caption='[[5mp0]], [[Resolution|resolution]] 1.63&Aring;' scene=''>
-Authors: Mathea, S., Salah, E., Velupillai, S., Tallant, C., Pike, A.C.W., Bushell, S.R., Faust, B., Wang, D., Burgess-Brown, N., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Knapp, S., Huber, K.
+== Structural highlights ==
+<table><tr><td colspan='2'>[[5mp0]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MP0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5MP0 FirstGlance]. <br>
-Description: Human m7GpppN-mRNA Hydrolase (DCP2, NUDT20) Catalytic Domain
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.63&#8491;</td></tr>
-[[Category: Unreleased Structures]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
-[[Category: Pike, A.C.W]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5mp0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5mp0 OCA], [https://pdbe.org/5mp0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5mp0 RCSB], [https://www.ebi.ac.uk/pdbsum/5mp0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5mp0 ProSAT]</span></td></tr>
-[[Category: Burgess-Brown, N]]
+</table>
-[[Category: Velupillai, S]]
+== Function ==
-[[Category: Wang, D]]
+[https://www.uniprot.org/uniprot/DCP2_HUMAN DCP2_HUMAN] Decapping metalloenzyme that catalyzes the cleavage of the cap structure on mRNAs (PubMed:12417715, PubMed:12218187, PubMed:12923261, PubMed:21070968). Removes the 7-methyl guanine cap structure from mRNA molecules, yielding a 5'-phosphorylated mRNA fragment and 7m-GDP (PubMed:12486012, PubMed:12923261, PubMed:21070968). Necessary for the degradation of mRNAs, both in normal mRNA turnover and in nonsense-mediated mRNA decay (PubMed:14527413). Plays a role in replication-dependent histone mRNA degradation (PubMed:18172165). Has higher activity towards mRNAs that lack a poly(A) tail (PubMed:21070968). Has no activity towards a cap structure lacking an RNA moiety (PubMed:21070968). Blocks autophagy in nutrient-rich conditions by repressing the expression of ATG-related genes through degration of their transcripts (PubMed:26098573).<ref>PMID:12218187</ref> <ref>PMID:12417715</ref> <ref>PMID:12486012</ref> <ref>PMID:12923261</ref> <ref>PMID:14527413</ref> <ref>PMID:18172165</ref> <ref>PMID:21070968</ref> <ref>PMID:26098573</ref>
-[[Category: Faust, B]]
+== References ==
-[[Category: Knapp, S]]
+<references/>
-[[Category: Bountra, C]]
+__TOC__
-[[Category: Bushell, S.R]]
+</StructureSection>
-[[Category: Huber, K]]
+[[Category: Homo sapiens]]
-[[Category: Mathea, S]]
+[[Category: Large Structures]]
-[[Category: Arrowsmith, C.H]]
+[[Category: Arrowsmith CH]]
-[[Category: Von Delft, F]]
+[[Category: Bountra C]]
-[[Category: Edwards, A.M]]
+[[Category: Burgess-Brown N]]
-[[Category: Tallant, C]]
+[[Category: Bushell SR]]
-[[Category: Salah, E]]
+[[Category: Edwards AM]]
+[[Category: Faust B]]
+[[Category: Huber K]]
+[[Category: Knapp S]]
+[[Category: Mathea S]]
+[[Category: Pike ACW]]
+[[Category: Salah E]]
+[[Category: Tallant C]]
+[[Category: Velupillai S]]
+[[Category: Wang D]]
+[[Category: Von Delft F]]