5wt9: Difference between revisions
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==Complex structure of PD-1 and nivolumab-Fab== | ==Complex structure of PD-1 and nivolumab-Fab== | ||
<StructureSection load='5wt9' size='340' side='right' caption='[[5wt9]], [[Resolution|resolution]] 2.40Å' scene=''> | <StructureSection load='5wt9' size='340' side='right'caption='[[5wt9]], [[Resolution|resolution]] 2.40Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[5wt9]] is a 3 chain structure with sequence from [ | <table><tr><td colspan='2'>[[5wt9]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5WT9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5WT9 FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.401Å</td></tr> | ||
<tr id=' | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5wt9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5wt9 OCA], [https://pdbe.org/5wt9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5wt9 RCSB], [https://www.ebi.ac.uk/pdbsum/5wt9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5wt9 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Disease == | == Disease == | ||
[ | [https://www.uniprot.org/uniprot/PDCD1_HUMAN PDCD1_HUMAN] Systemic lupus erythematosus;Multiple sclerosis. Systemic lupus erythematosus 2 (SLEB2) [MIM:[https://omim.org/entry/605218 605218]: A chronic, relapsing, inflammatory, and often febrile multisystemic disorder of connective tissue, characterized principally by involvement of the skin, joints, kidneys and serosal membranes. It is of unknown etiology, but is thought to represent a failure of the regulatory mechanisms of the autoimmune system. The disease is marked by a wide range of system dysfunctions, an elevated erythrocyte sedimentation rate, and the formation of LE cells in the blood or bone marrow. Note=Disease susceptibility is associated with variations affecting the gene represented in this entry.<ref>PMID:12402038</ref> | ||
== Function == | == Function == | ||
[ | [https://www.uniprot.org/uniprot/PDCD1_HUMAN PDCD1_HUMAN] Inhibitory cell surface receptor involved in the regulation of T-cell function during immunity and tolerance. Upon ligand binding, inhibits T-cell effector functions in an antigen-specific manner. Possible cell death inducer, in association with other factors.<ref>PMID:21276005</ref> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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</div> | </div> | ||
<div class="pdbe-citations 5wt9" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 5wt9" style="background-color:#fffaf0;"></div> | ||
==See Also== | |||
*[[Cell death protein 3D structures|Cell death protein 3D structures]] | |||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Homo sapiens]] | ||
[[Category: Chai | [[Category: Large Structures]] | ||
[[Category: Gao | [[Category: Chai Y]] | ||
[[Category: Gao | [[Category: Gao GF]] | ||
[[Category: Liu | [[Category: Gao S]] | ||
[[Category: Qi | [[Category: Liu WJ]] | ||
[[Category: Shi | [[Category: Qi J]] | ||
[[Category: Song | [[Category: Shi Y]] | ||
[[Category: Tan | [[Category: Song H]] | ||
[[Category: Tong | [[Category: Tan S]] | ||
[[Category: Wang | [[Category: Tong Z]] | ||
[[Category: Wang | [[Category: Wang Q]] | ||
[[Category: Wong | [[Category: Wang Z]] | ||
[[Category: Yan | [[Category: Wong G]] | ||
[[Category: Yang | [[Category: Yan J]] | ||
[[Category: Zhang | [[Category: Yang F]] | ||
[[Category: Zhu | [[Category: Zhang H]] | ||
[[Category: Zhu X]] | |||