5b4z: Difference between revisions
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==Crystal structure of heme binding protein HmuT H141A mutant== | ==Crystal structure of heme binding protein HmuT H141A mutant== | ||
<StructureSection load='5b4z' size='340' side='right' caption='[[5b4z]], [[Resolution|resolution]] 1.30Å' scene=''> | <StructureSection load='5b4z' size='340' side='right'caption='[[5b4z]], [[Resolution|resolution]] 1.30Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[5b4z]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5B4Z OCA]. For a <b>guided tour on the structure components</b> use [ | <table><tr><td colspan='2'>[[5b4z]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Corynebacterium_glutamicum_ATCC_13032 Corynebacterium glutamicum ATCC 13032]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5B4Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5B4Z FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3Å</td></tr> | ||
<tr id=' | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5b4z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5b4z OCA], [https://pdbe.org/5b4z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5b4z RCSB], [https://www.ebi.ac.uk/pdbsum/5b4z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5b4z ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/Q8NTB8_CORGL Q8NTB8_CORGL] | |||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Corynebacterium glutamicum ATCC 13032]] | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: | [[Category: Aono S]] | ||
[[Category: | [[Category: Muraki N]] | ||
Latest revision as of 18:59, 8 November 2023
Crystal structure of heme binding protein HmuT H141A mutantCrystal structure of heme binding protein HmuT H141A mutant
Structural highlights
FunctionPublication Abstract from PubMedCorynebacteria contain a heme uptake system encoded in hmuTUV genes, in which HmuT protein acts as a heme binding protein to transport heme to the cognate transporter HmuUV. The crystal structure of HmuT from Corynebacterium glutamicum (CgHmuT) reveals that heme is accommodated in the central cleft with His141 and Tyr240 as the axial ligands and that Tyr240 forms a hydrogen bond with Arg242. In this work, the crystal structures of H141A, Y240A, and R242A mutants were determined to understand the role of these residues for the heme binding of CgHmuT. Overall and heme environmental structures of these mutants were similar to those of the wild type, suggesting that there is little conformational change in the heme-binding cleft during heme transport reaction with binding and the dissociation of heme. A loss of one axial ligand or the hydrogen bonding interaction with Tyr240 resulted in an increase in the redox potential of the heme for CgHmuT to be reduced by dithionite, though the wild type was not reduced under physiological conditions. These results suggest that the heme environmental structure stabilizes the ferric heme binding in CgHmuT, which will be responsible for efficient heme uptake under aerobic conditions where Corynebacteria grow. Structural Characterization of Heme Environmental Mutants of CgHmuT that Shuttles Heme Molecules to Heme Transporters.,Muraki N, Kitatsuji C, Ogura M, Uchida T, Ishimori K, Aono S Int J Mol Sci. 2016 May 27;17(6). pii: E829. doi: 10.3390/ijms17060829. PMID:27240352[1] From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine. References
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