5b40: Difference between revisions

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<StructureSection load='5b40' size='340' side='right'caption='[[5b40]], [[Resolution|resolution]] 3.33&Aring;' scene=''>
<StructureSection load='5b40' size='340' side='right'caption='[[5b40]], [[Resolution|resolution]] 3.33&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5b40]] is a 10 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5B40 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5B40 FirstGlance]. <br>
<table><tr><td colspan='2'>[[5b40]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5B40 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5B40 FirstGlance]. <br>
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">HIST2H3A, HIST2H3C, H3F2, H3FM, HIST2H3D ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN]), HIST1H4A, H4/A, H4FA, HIST1H4B, H4/I, H4FI, HIST1H4C, H4/G, H4FG, HIST1H4D, H4/B, H4FB, HIST1H4E, H4/J, H4FJ, HIST1H4F, H4/C, H4FC, HIST1H4H, H4/H, H4FH, HIST1H4I, H4/M, H4FM, HIST1H4J, H4/E, H4FE, HIST1H4K, H4/D, H4FD, HIST1H4L, H4/K, H4FK, HIST2H4A, H4/N, H4F2, H4FN, HIST2H4, HIST2H4B, H4/O, H4FO, HIST4H4 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN]), HIST1H2AB, H2AFM, HIST1H2AE, H2AFA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN]), HIST1H2BJ, H2BFR ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.33&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5b40 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5b40 OCA], [http://pdbe.org/5b40 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5b40 RCSB], [http://www.ebi.ac.uk/pdbsum/5b40 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5b40 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5b40 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5b40 OCA], [https://pdbe.org/5b40 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5b40 RCSB], [https://www.ebi.ac.uk/pdbsum/5b40 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5b40 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/H2B1J_HUMAN H2B1J_HUMAN]] Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.<ref>PMID:11859126</ref> <ref>PMID:12860195</ref> <ref>PMID:15019208</ref>  Has broad antibacterial activity. May contribute to the formation of the functional antimicrobial barrier of the colonic epithelium, and to the bactericidal activity of amniotic fluid.<ref>PMID:11859126</ref> <ref>PMID:12860195</ref> <ref>PMID:15019208</ref> 
[https://www.uniprot.org/uniprot/H32_HUMAN H32_HUMAN]  


==See Also==
==See Also==
*[[Histone 3D structures|Histone 3D structures]]
*[[Histone 3D structures|Histone 3D structures]]
== References ==
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Human]]
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Horikoshi, N]]
[[Category: Horikoshi N]]
[[Category: Kurumizaka, H]]
[[Category: Kurumizaka H]]
[[Category: Machida, S]]
[[Category: Machida S]]
[[Category: Nishiyama, Y]]
[[Category: Nishiyama Y]]
[[Category: Sekine, S]]
[[Category: Sekine S]]
[[Category: Chromatin]]
[[Category: Histone modification]]
[[Category: Nucleosome]]
[[Category: Structural protein-dna complex]]
[[Category: Ubiquitin]]

Latest revision as of 18:59, 8 November 2023

The nucleosome structure containing H2B-K120 and H4-K31 monoubiquitinationsThe nucleosome structure containing H2B-K120 and H4-K31 monoubiquitinations

Structural highlights

5b40 is a 10 chain structure with sequence from Homo sapiens. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 3.33Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

H32_HUMAN

See Also

5b40, resolution 3.33Å

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OCA
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