4yjh: Difference between revisions

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'''Unreleased structure'''


The entry 4yjh is ON HOLD  until Paper Publication
==Crystal structure of DAAO(Y228L/R283G) variant (R-2-phenylpyrrolidine binding form)==
<StructureSection load='4yjh' size='340' side='right'caption='[[4yjh]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[4yjh]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YJH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4YJH FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=96B:(2R)-2-PHENYLPYRROLIDINE'>96B</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4yjh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4yjh OCA], [https://pdbe.org/4yjh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4yjh RCSB], [https://www.ebi.ac.uk/pdbsum/4yjh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4yjh ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/OXDA_PIG OXDA_PIG] Regulates the level of the neuromodulator D-serine in the brain. Has high activity towards D-DOPA and contributes to dopamine synthesis. Could act as a detoxifying agent which removes D-amino acids accumulated during aging. Acts on a variety of D-amino acids with a preference for those having small hydrophobic side chains followed by those bearing polar, aromatic, and basic groups. Does not act on acidic amino acids.


Authors: Nakano, S., Yasukawa, K., Kawahara, N., Ishitsubo, E., Tokiwa, H., Asano, Y.
==See Also==
 
*[[Amino acid oxidase 3D structures|Amino acid oxidase 3D structures]]
Description: Crystal structure of DAAO(Y228L/R283G) variant (R-2-phenylpyrrolidine binding form)
__TOC__
[[Category: Unreleased Structures]]
</StructureSection>
[[Category: Yasukawa, K]]
[[Category: Large Structures]]
[[Category: Nakano, S]]
[[Category: Sus scrofa]]
[[Category: Tokiwa, H]]
[[Category: Asano Y]]
[[Category: Asano, Y]]
[[Category: Ishitsubo E]]
[[Category: Kawahara, N]]
[[Category: Kawahara N]]
[[Category: Ishitsubo, E]]
[[Category: Nakano S]]
[[Category: Tokiwa H]]
[[Category: Yasukawa K]]

Latest revision as of 18:35, 8 November 2023

Crystal structure of DAAO(Y228L/R283G) variant (R-2-phenylpyrrolidine binding form)Crystal structure of DAAO(Y228L/R283G) variant (R-2-phenylpyrrolidine binding form)

Structural highlights

4yjh is a 2 chain structure with sequence from Sus scrofa. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.7Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

OXDA_PIG Regulates the level of the neuromodulator D-serine in the brain. Has high activity towards D-DOPA and contributes to dopamine synthesis. Could act as a detoxifying agent which removes D-amino acids accumulated during aging. Acts on a variety of D-amino acids with a preference for those having small hydrophobic side chains followed by those bearing polar, aromatic, and basic groups. Does not act on acidic amino acids.

See Also

4yjh, resolution 2.70Å

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