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==Enterobacteria phage T4 gp5.4 PAAR repeat protein in complex with T4 gp5 beta-helix fragment==
==Enterobacteria phage T4 gp5.4 PAAR repeat protein in complex with T4 gp5 beta-helix fragment==
<StructureSection load='4ku0' size='340' side='right' caption='[[4ku0]], [[Resolution|resolution]] 1.15&Aring;' scene=''>
<StructureSection load='4ku0' size='340' side='right'caption='[[4ku0]], [[Resolution|resolution]] 1.15&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4ku0]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KU0 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4KU0 FirstGlance]. <br>
<table><tr><td colspan='2'>[[4ku0]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_virus_T4 Escherichia virus T4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KU0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4KU0 FirstGlance]. <br>
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=ELA:9-OCTADECENOIC+ACID'>ELA</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PLM:PALMITIC+ACID'>PLM</scene>, <scene name='pdbligand=STE:STEARIC+ACID'>STE</scene><br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.15&#8491;</td></tr>
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4jj2|4jj2]], [[4jiv|4jiv]], [[4jiw|4jiw]], [[1k28|1k28]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=ELA:9-OCTADECENOIC+ACID'>ELA</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PLM:PALMITIC+ACID'>PLM</scene>, <scene name='pdbligand=STE:STEARIC+ACID'>STE</scene></td></tr>
<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ku0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ku0 OCA], [https://pdbe.org/4ku0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ku0 RCSB], [https://www.ebi.ac.uk/pdbsum/4ku0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ku0 ProSAT]</span></td></tr>
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ku0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ku0 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4ku0 RCSB], [http://www.ebi.ac.uk/pdbsum/4ku0 PDBsum]</span></td></tr>
</table>
<table>
== Function ==
[https://www.uniprot.org/uniprot/NEED5_BPT4 NEED5_BPT4] Baseplate central spike complex-associated protein. Makes the tip of the central spike which probably punctures the host outer membrane, a necessary step for viral DNA ejection into the host cell.<ref>PMID:27193680</ref> [REFERENCE:2]
 
==See Also==
*[[Lysozyme 3D structures|Lysozyme 3D structures]]
== References ==
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Lysozyme]]
[[Category: Escherichia virus T4]]
[[Category: Buth, S A.]]
[[Category: Large Structures]]
[[Category: Leiman, P G.]]
[[Category: Buth SA]]
[[Category: Shneider, M M.]]
[[Category: Leiman PG]]
[[Category: Beta-helix]]
[[Category: Shneider MM]]
[[Category: Cell puncturing device]]
[[Category: Gp5-gp27 protein complex]]
[[Category: Hydrolase-protein binding complex]]
[[Category: Membrane piercing]]
[[Category: Paar-repeat motif]]
[[Category: T6ss]]
[[Category: Type vi secretion system]]

Latest revision as of 17:31, 8 November 2023

Enterobacteria phage T4 gp5.4 PAAR repeat protein in complex with T4 gp5 beta-helix fragmentEnterobacteria phage T4 gp5.4 PAAR repeat protein in complex with T4 gp5 beta-helix fragment

Structural highlights

4ku0 is a 4 chain structure with sequence from Escherichia virus T4. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.15Å
Ligands:, , , , , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

NEED5_BPT4 Baseplate central spike complex-associated protein. Makes the tip of the central spike which probably punctures the host outer membrane, a necessary step for viral DNA ejection into the host cell.[1] [REFERENCE:2]

See Also

References

  1. ↑ Taylor NM, Prokhorov NS, Guerrero-Ferreira RC, Shneider MM, Browning C, Goldie KN, Stahlberg H, Leiman PG. Structure of the T4 baseplate and its function in triggering sheath contraction. Nature. 2016 May 18;533(7603):346-52. doi: 10.1038/nature17971. PMID:27193680 doi:http://dx.doi.org/10.1038/nature17971

4ku0, resolution 1.15Å

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