4km3: Difference between revisions

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OCA

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 ==Discovery of a novel structural motif in methionine aminopeptidase from Streptococci with possible post-translational modification==
-<StructureSection load='4km3' size='340' side='right' caption='[[4km3]], [[Resolution|resolution]] 3.20&Aring;' scene=''>
+<StructureSection load='4km3' size='340' side='right'caption='[[4km3]], [[Resolution|resolution]] 3.20&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[4km3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Strps Strps]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KM3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4KM3 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[4km3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae_CGSP14 Streptococcus pneumoniae CGSP14]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KM3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4KM3 FirstGlance]. <br>
-</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">map, SPCG_1194 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=516950 STRPS])</td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.2&#8491;</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4km3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4km3 OCA], [http://pdbe.org/4km3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4km3 RCSB], [http://www.ebi.ac.uk/pdbsum/4km3 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4km3 ProSAT]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4km3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4km3 OCA], [https://pdbe.org/4km3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4km3 RCSB], [https://www.ebi.ac.uk/pdbsum/4km3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4km3 ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/B2IQ22_STRPS B2IQ22_STRPS]] Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed (By similarity).[HAMAP-Rule:MF_01974]
+[https://www.uniprot.org/uniprot/B2IQ22_STRPS B2IQ22_STRPS] Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed (By similarity).[HAMAP-Rule:MF_01974]
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 20: / Line 20: @@
 ==See Also==
-*[[Aminopeptidase|Aminopeptidase]]
+*[[Aminopeptidase 3D structures|Aminopeptidase 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Strps]]
+[[Category: Large Structures]]
-[[Category: Addlagatta, A]]
+[[Category: Streptococcus pneumoniae CGSP14]]
-[[Category: Arya, T]]
+[[Category: Addlagatta A]]
-[[Category: Classification]]
+[[Category: Arya T]]
-[[Category: Hydrolase]]