4jcl: Difference between revisions

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 ==Crystal structure of Alpha-CGT from Paenibacillus macerans at 1.7 Angstrom resolution==
-<StructureSection load='4jcl' size='340' side='right' caption='[[4jcl]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
+<StructureSection load='4jcl' size='340' side='right'caption='[[4jcl]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[4jcl]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"aerobacillus_macerans"_(schardinger_1905)_donker_1926 "aerobacillus macerans" (schardinger 1905) donker 1926]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JCL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4JCL FirstGlance]. <br>
+<table><tr><td colspan='2'>[[4jcl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Paenibacillus_macerans Paenibacillus macerans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JCL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4JCL FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4jcm|4jcm]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">cgtM ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=44252 "Aerobacillus macerans" (Schardinger 1905) Donker 1926])</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4jcl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jcl OCA], [https://pdbe.org/4jcl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4jcl RCSB], [https://www.ebi.ac.uk/pdbsum/4jcl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4jcl ProSAT]</span></td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cyclomaltodextrin_glucanotransferase Cyclomaltodextrin glucanotransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.19 2.4.1.19] </span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4jcl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jcl OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4jcl RCSB], [http://www.ebi.ac.uk/pdbsum/4jcl PDBsum]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/CDGT1_PAEMA CDGT1_PAEMA]
+==See Also==
+*[[Glycosyltransferase 3D structures|Glycosyltransferase 3D structures]]
 __TOC__
 </StructureSection>
-[[Category: Cyclomaltodextrin glucanotransferase]]
+[[Category: Large Structures]]
-[[Category: Chen, J]]
+[[Category: Paenibacillus macerans]]
-[[Category: Li, J]]
+[[Category: Chen J]]
-[[Category: Wu, J]]
+[[Category: Li J]]
-[[Category: Wu, L]]
+[[Category: Wu J]]
-[[Category: Zhou, J]]
+[[Category: Wu L]]
-[[Category: Alpha beta barrel]]
+[[Category: Zhou J]]
-[[Category: Alpha cyclodextrin glycosyltransferase]]
-[[Category: Calcium binding]]
-[[Category: Transferase]]