3stf: Difference between revisions

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 ==Crystal structure of a mutant (S211A) of 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8PS) from Neisseria meningitidis==
-<StructureSection load='3stf' size='340' side='right' caption='[[3stf]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
+<StructureSection load='3stf' size='340' side='right'caption='[[3stf]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[3stf]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Neisseria_meningitidis Neisseria meningitidis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3STF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3STF FirstGlance]. <br>
+<table><tr><td colspan='2'>[[3stf]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Neisseria_meningitidis_MC58 Neisseria meningitidis MC58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3STF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3STF FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3stc|3stc]], [[3ste|3ste]], [[3stg|3stg]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">kdsA, NMB1283 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=487 Neisseria meningitidis])</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3stf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3stf OCA], [https://pdbe.org/3stf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3stf RCSB], [https://www.ebi.ac.uk/pdbsum/3stf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3stf ProSAT]</span></td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-deoxy-8-phosphooctulonate_synthase 3-deoxy-8-phosphooctulonate synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.55 2.5.1.55] </span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3stf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3stf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3stf RCSB], [http://www.ebi.ac.uk/pdbsum/3stf PDBsum]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/KDSA_NEIMB KDSA_NEIMB]
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 17: / Line 18: @@
 From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 </div>
+<div class="pdbe-citations 3stf" style="background-color:#fffaf0;"></div>
 ==See Also==
@@ Line 24: / Line 26: @@
 __TOC__
 </StructureSection>
-[[Category: 3-deoxy-8-phosphooctulonate synthase]]
+[[Category: Large Structures]]
-[[Category: Neisseria meningitidis]]
+[[Category: Neisseria meningitidis MC58]]
-[[Category: Allison, T M]]
+[[Category: Allison TM]]
-[[Category: Gloyne, B J]]
+[[Category: Gloyne BJ]]
-[[Category: Jameson, G B]]
+[[Category: Jameson GB]]
-[[Category: Parker, E J]]
+[[Category: Parker EJ]]
-[[Category: Biosynthesis]]
-[[Category: Kdo8 kdop]]
-[[Category: Kdo8p]]
-[[Category: Kdop]]
-[[Category: Lipopolysaccharide]]
-[[Category: Lipopolysaccharide biosynthesis]]
-[[Category: Lyase]]
-[[Category: Manno-octulosonate]]
-[[Category: Synthase]]
-[[Category: Tim barrel]]
-[[Category: Transferase]]