3cno: Difference between revisions

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-{{Seed}}
-[[Image:3cno.png|left|200px]]
-<!--
+==GDP-bound structue of TM YlqF==
-The line below this paragraph, containing "STRUCTURE_3cno", creates the "Structure Box" on the page.
+<StructureSection load='3cno' size='340' side='right'caption='[[3cno]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[3cno]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CNO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CNO FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene></td></tr>
-{{STRUCTURE_3cno|  PDB=3cno  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cno FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cno OCA], [https://pdbe.org/3cno PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cno RCSB], [https://www.ebi.ac.uk/pdbsum/3cno PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cno ProSAT]</span></td></tr>
+</table>
-===GDP-bound structue of TM YlqF===
+== Function ==
+[https://www.uniprot.org/uniprot/RBGA_THEMA RBGA_THEMA] Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity. Binds to the 23S rRNA (By similarity).[UniProtKB:O31743]
+== Evolutionary Conservation ==
-==About this Structure==
+[[Image:Consurf_key_small.gif|200px|right]]
-CNO is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CNO OCA].
+Check<jmol>
+  <jmolCheckbox>
-==Reference==
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cn/3cno_consurf.spt"</scriptWhenChecked>
-Crystal structure of YlqF, a circularly permuted GTPase: Implications for its GTPase activation in 50 S ribosomal subunit assembly., Kim DJ, Jang JY, Yoon HJ, Suh SW, Proteins. 2008 Jun 5;72(4):1363-1370. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18536017 18536017]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: Single protein]]
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cno ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
 [[Category: Thermotoga maritima]]
-[[Category: Jang, J Y.]]
+[[Category: Jang JY]]
-[[Category: Kim, D J.]]
+[[Category: Kim DJ]]
-[[Category: Suh, S W.]]
+[[Category: Suh SW]]
-[[Category: Yoon, H J.]]
+[[Category: Yoon H-J]]
-[[Category: Circular permutation]]
-[[Category: Gdp]]
-[[Category: Signaling protein]]
-[[Category: Ylqf]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 03:51:53 2008''