3cff: Difference between revisions

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[[Image:3cff.png|left|200px]]


<!--
==Photoswitchable red fluorescent protein psRFP, on-state==
The line below this paragraph, containing "STRUCTURE_3cff", creates the "Structure Box" on the page.
<StructureSection load='3cff' size='340' side='right'caption='[[3cff]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3cff]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Anemonia_sulcata Anemonia sulcata]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CFF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CFF FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CME:S,S-(2-HYDROXYETHYL)THIOCYSTEINE'>CME</scene>, <scene name='pdbligand=NRQ:{(4Z)-4-(4-HYDROXYBENZYLIDENE)-2-[3-(METHYLTHIO)PROPANIMIDOYL]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>NRQ</scene></td></tr>
{{STRUCTURE_3cff| PDB=3cff |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cff FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cff OCA], [https://pdbe.org/3cff PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cff RCSB], [https://www.ebi.ac.uk/pdbsum/3cff PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cff ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/NFCP_ANESU NFCP_ANESU] Pigment protein that is intensely purple in color.<ref>PMID:10852900</ref>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cf/3cff_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cff ConSurf].
<div style="clear:both"></div>


===Photoswitchable red fluorescent protein psRFP, on-state===
==See Also==
 
*[[Green Fluorescent Protein 3D structures|Green Fluorescent Protein 3D structures]]
 
== References ==
==About this Structure==
<references/>
3CFF is a 8 chains structure of sequences from [http://en.wikipedia.org/wiki/Anemonia_sulcata Anemonia sulcata]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CFF OCA].
__TOC__
</StructureSection>
[[Category: Anemonia sulcata]]
[[Category: Anemonia sulcata]]
[[Category: Bartunik, H D.]]
[[Category: Large Structures]]
[[Category: Gundel, S.]]
[[Category: Bartunik HD]]
[[Category: Kachalova, G S.]]
[[Category: Gundel S]]
[[Category: Wiedenmann, J.]]
[[Category: Kachalova GS]]
[[Category: Beta barrel]]
[[Category: Wiedenmann J]]
[[Category: Beta can]]
[[Category: Chromophore]]
[[Category: Fluorescent protein]]
[[Category: Photoactivation]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 25 11:29:01 2009''

Latest revision as of 17:57, 1 November 2023

Photoswitchable red fluorescent protein psRFP, on-statePhotoswitchable red fluorescent protein psRFP, on-state

Structural highlights

3cff is a 8 chain structure with sequence from Anemonia sulcata. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.8Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

NFCP_ANESU Pigment protein that is intensely purple in color.[1]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

References

  1. ↑ Lukyanov KA, Fradkov AF, Gurskaya NG, Matz MV, Labas YA, Savitsky AP, Markelov ML, Zaraisky AG, Zhao X, Fang Y, Tan W, Lukyanov SA. Natural animal coloration can Be determined by a nonfluorescent green fluorescent protein homolog. J Biol Chem. 2000 Aug 25;275(34):25879-82. PMID:10852900 doi:http://dx.doi.org/10.1074/jbc.C000338200

3cff, resolution 1.80Å

Drag the structure with the mouse to rotate

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OCA
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